~tfardet/#1257690

success

276c427Tanguy Fardet

Install openmp

Owner
~tfardet
Created
4 months ago
Updated
4 months ago
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setup
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[#1257690] 2024/06/22 06:47:06 Booting image ubuntu/lts (default) on port 22654
[#1257690] 2024/06/22 06:47:07 Waiting for guest to settle
[#1257690] 2024/06/22 06:47:15 Sending tasks
[#1257690] 2024/06/22 06:47:18 Sending build environment
[#1257690] 2024/06/22 06:47:18 Sending secrets
[#1257690] 2024/06/22 06:47:18 Resolving secret ceb490c3-68b4-41f7-9aa9-eb2e4b91d424
[#1257690] 2024/06/22 06:47:19 Resolving secret 0b249c79-8eaf-4b82-b1d1-f3c38c7eae4b
[#1257690] 2024/06/22 06:47:20 Resolving secret 3a7c042a-24d8-4f53-b75c-f061f7517b65
[#1257690] 2024/06/22 06:47:21 Installing packages
Warning: Permanently added '[localhost]:22654' (ED25519) to the list of known hosts.
Hit:1 http://archive.ubuntu.com/ubuntu jammy InRelease
Get:2 http://archive.ubuntu.com/ubuntu jammy-security InRelease [129 kB]
Get:3 http://archive.ubuntu.com/ubuntu jammy-updates InRelease [128 kB]
Hit:4 http://archive.ubuntu.com/ubuntu jammy-backports InRelease
Get:5 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 Packages [1526 kB]
Get:6 http://archive.ubuntu.com/ubuntu jammy-security/main Translation-en [261 kB]
Get:7 http://archive.ubuntu.com/ubuntu jammy-security/universe amd64 Packages [860 kB]
Get:8 http://archive.ubuntu.com/ubuntu jammy-security/universe Translation-en [167 kB]
Get:9 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 Packages [1734 kB]
Get:10 http://archive.ubuntu.com/ubuntu jammy-updates/universe amd64 Packages [1087 kB]
Fetched 5892 kB in 1s (8169 kB/s)
Reading package lists...
Warning: Permanently added '[localhost]:22654' (ED25519) to the list of known hosts.
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
  javascript-common libexpat1-dev libjs-jquery libjs-sphinxdoc
  libjs-underscore libpython3-dev libpython3.10 libpython3.10-dev python3-dev
  python3-distutils python3-lib2to3 python3-pip-whl python3-setuptools
  python3-setuptools-whl python3-wheel python3.10-dev python3.10-venv
  zlib1g-dev
Suggested packages:
  apache2 | lighttpd | httpd python-setuptools-doc
The following NEW packages will be installed:
  javascript-common libexpat1-dev libjs-jquery libjs-sphinxdoc
  libjs-underscore libpython3-dev libpython3.10 libpython3.10-dev python3-dev
  python3-distutils python3-lib2to3 python3-pip python3-pip-whl
  python3-setuptools python3-setuptools-whl python3-venv python3-wheel
  python3.10-dev python3.10-venv zlib1g-dev
0 upgraded, 20 newly installed, 0 to remove and 3 not upgraded.
Need to get 12.5 MB of archives.
After this operation, 43.4 MB of additional disk space will be used.
Get:1 http://archive.ubuntu.com/ubuntu jammy/main amd64 javascript-common all 11+nmu1 [5936 B]
Get:2 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libexpat1-dev amd64 2.4.7-1ubuntu0.3 [147 kB]
Get:3 http://archive.ubuntu.com/ubuntu jammy/main amd64 libjs-jquery all 3.6.0+dfsg+~3.5.13-1 [321 kB]
Get:4 http://archive.ubuntu.com/ubuntu jammy/main amd64 libjs-underscore all 1.13.2~dfsg-2 [118 kB]
Get:5 http://archive.ubuntu.com/ubuntu jammy/main amd64 libjs-sphinxdoc all 4.3.2-1 [139 kB]
Get:6 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libpython3.10 amd64 3.10.12-1~22.04.3 [1948 kB]
Get:7 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2ubuntu9.2 [164 kB]
Get:8 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libpython3.10-dev amd64 3.10.12-1~22.04.3 [4762 kB]
Get:9 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libpython3-dev amd64 3.10.6-1~22.04 [7166 B]
Get:10 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 python3.10-dev amd64 3.10.12-1~22.04.3 [507 kB]
Get:11 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 python3-lib2to3 all 3.10.8-1~22.04 [77.6 kB]
Get:12 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 python3-distutils all 3.10.8-1~22.04 [139 kB]
Get:13 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 python3-dev amd64 3.10.6-1~22.04 [26.0 kB]
Get:14 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 python3-setuptools all 59.6.0-1.2ubuntu0.22.04.1 [339 kB]
Get:15 http://archive.ubuntu.com/ubuntu jammy-security/universe amd64 python3-wheel all 0.37.1-2ubuntu0.22.04.1 [32.0 kB]
Get:16 http://archive.ubuntu.com/ubuntu jammy-security/universe amd64 python3-pip all 22.0.2+dfsg-1ubuntu0.4 [1305 kB]
Get:17 http://archive.ubuntu.com/ubuntu jammy-security/universe amd64 python3-pip-whl all 22.0.2+dfsg-1ubuntu0.4 [1680 kB]
Get:18 http://archive.ubuntu.com/ubuntu jammy-security/universe amd64 python3-setuptools-whl all 59.6.0-1.2ubuntu0.22.04.1 [788 kB]
Get:19 http://archive.ubuntu.com/ubuntu jammy-security/universe amd64 python3.10-venv amd64 3.10.12-1~22.04.3 [5716 B]
Get:20 http://archive.ubuntu.com/ubuntu jammy-security/universe amd64 python3-venv amd64 3.10.6-1~22.04 [1038 B]
Fetched 12.5 MB in 0s (58.8 MB/s)
Selecting previously unselected package javascript-common.
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(Reading database ... 39171 files and directories currently installed.)
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Unpacking python3-venv (3.10.6-1~22.04) ...
Setting up javascript-common (11+nmu1) ...
Setting up libpython3.10:amd64 (3.10.12-1~22.04.3) ...
Setting up python3-setuptools-whl (59.6.0-1.2ubuntu0.22.04.1) ...
Setting up python3-pip-whl (22.0.2+dfsg-1ubuntu0.4) ...
Setting up libexpat1-dev:amd64 (2.4.7-1ubuntu0.3) ...
Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu9.2) ...
Setting up libjs-jquery (3.6.0+dfsg+~3.5.13-1) ...
Setting up python3-lib2to3 (3.10.8-1~22.04) ...
Setting up libjs-underscore (1.13.2~dfsg-2) ...
Setting up python3-distutils (3.10.8-1~22.04) ...
Setting up python3.10-venv (3.10.12-1~22.04.3) ...
Setting up python3-setuptools (59.6.0-1.2ubuntu0.22.04.1) ...
Setting up python3-wheel (0.37.1-2ubuntu0.22.04.1) ...
Setting up python3-venv (3.10.6-1~22.04) ...
Setting up libpython3.10-dev:amd64 (3.10.12-1~22.04.3) ...
Setting up python3-pip (22.0.2+dfsg-1ubuntu0.4) ...
Setting up libjs-sphinxdoc (4.3.2-1) ...
Setting up python3.10-dev (3.10.12-1~22.04.3) ...
Setting up libpython3-dev:amd64 (3.10.6-1~22.04) ...
Setting up python3-dev (3.10.6-1~22.04) ...
Processing triggers for libc-bin (2.35-0ubuntu3.8) ...
[#1257690] 2024/06/22 06:47:25 Cloning repositories
Cloning into 'NNGT'...
+ cd NNGT
+ git checkout -q 276c4270a27f75f08eb8d624d75ca357f4403b47
+ cd NNGT
+ git submodule update --init --recursive
Submodule 'nngt/geometry' (https://github.com/SENeC-Initiative/PyNCulture.git) registered for path 'nngt/geometry'
Submodule 'nngt/plot/chord_diag' (https://codeberg.org/tfardet/mpl_chord_diagram.git) registered for path 'nngt/plot/chord_diag'
Cloning into '/home/build/NNGT/nngt/geometry'...
Cloning into '/home/build/NNGT/nngt/plot/chord_diag'...
Submodule path 'nngt/geometry': checked out '98364e970315705ba32265e7d7bae90105b868c3'
Submodule path 'nngt/plot/chord_diag': checked out '418e3ab73dad2f326e76d2bc13c7be9eb6a247b9'
[#1257690] 2024/06/22 06:47:27 Running task mkvenv
[#1257690] 2024/06/22 06:47:29 Running task check
[#1257690] 2024/06/22 06:47:33 Running task setup
[#1257690] 2024/06/22 06:50:48 Running task test
[#1257690] 2024/06/22 06:57:53 Running task doc
mkvenv
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+ cd /home/build
+ python3 -m venv .nngt_env
+ source /home/build/.nngt_env/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /usr/bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/build/.nngt_env
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
++ PATH=/home/build/.nngt_env/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(.nngt_env) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(.nngt_env) '
++ export VIRTUAL_ENV_PROMPT
++ '[' -n /usr/bin/bash -o -n '' ']'
++ hash -r
+ echo 'source /home/build/.nngt_env/bin/activate'
check
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+ export PATH=/home/build/.local/bin:/home/build/.nngt_env/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+ PATH=/home/build/.local/bin:/home/build/.nngt_env/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
+ cd NNGT
+ python3 extra/check_headers.py
+ pip3 install reuse
Collecting reuse
  Downloading reuse-3.0.2.tar.gz (269 kB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 269.4/269.4 KB 10.6 MB/s eta 0:00:00
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Collecting binaryornot<0.5.0,>=0.4.4
  Downloading binaryornot-0.4.4-py2.py3-none-any.whl (9.0 kB)
Collecting python-debian!=0.1.45,!=0.1.46,!=0.1.47,<0.2.0,>=0.1.34
  Downloading python_debian-0.1.49-py3-none-any.whl (132 kB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 132.5/132.5 KB 26.1 MB/s eta 0:00:00
Collecting Jinja2<4.0.0,>=3.0.0
  Downloading jinja2-3.1.4-py3-none-any.whl (133 kB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 133.3/133.3 KB 51.8 MB/s eta 0:00:00
Collecting boolean.py>=3.8
  Downloading boolean.py-4.0-py3-none-any.whl (25 kB)
Collecting license-expression>=1.0
  Downloading license_expression-30.3.0-py3-none-any.whl (108 kB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 108.9/108.9 KB 24.4 MB/s eta 0:00:00
Collecting chardet>=3.0.2
  Downloading chardet-5.2.0-py3-none-any.whl (199 kB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 199.4/199.4 KB 33.8 MB/s eta 0:00:00
Collecting MarkupSafe>=2.0
  Downloading MarkupSafe-2.1.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (25 kB)
Building wheels for collected packages: reuse
  Building wheel for reuse (pyproject.toml): started
  Building wheel for reuse (pyproject.toml): finished with status 'done'
  Created wheel for reuse: filename=reuse-3.0.2-cp310-cp310-manylinux_2_35_x86_64.whl size=119657 sha256=91bebc3608eeea55875ac12fb9650ffa9738b8be4e8025014818adfddbb884c5
  Stored in directory: /home/build/.cache/pip/wheels/2b/57/24/d43da4d2afa2378313e911ca8254dd24b3becb9e0ee2d57e0b
Successfully built reuse
Installing collected packages: boolean.py, MarkupSafe, license-expression, chardet, python-debian, Jinja2, binaryornot, reuse
Successfully installed Jinja2-3.1.4 MarkupSafe-2.1.5 binaryornot-0.4.4 boolean.py-4.0 chardet-5.2.0 license-expression-30.3.0 python-debian-0.1.49 reuse-3.0.2
+ reuse lint

# SUMMARY

* Bad licenses: 0
* Deprecated licenses: 0
* Licenses without file extension: 0
* Missing licenses: 0
* Unused licenses: 0
* Used licenses: GPL-3.0-or-later, BSD-2-Clause, CC-BY-SA-4.0, Python-2.0, CC0-1.0
* Read errors: 0
* files with copyright information: 184 / 184
* files with license information: 184 / 184

Congratulations! Your project is compliant with version 3.0 of the REUSE Specification :-)
setup


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This is a big file! Only the last 128KiB is shown. Click here to download the full log.

  libucx0 libwebpdemux2 libwebpmux3 libxaw7 libxcb-render0 libxcb-shm0 libxft2
  libxml2-dev libxmu6 libxnvctrl0 libxrender1 libxsimd-dev libxslt1.1 libxss1
  libxt6 libz3-4 libz3-dev llvm-11 llvm-11-dev llvm-11-linker-tools
  llvm-11-runtime llvm-11-tools m4 mailcap mime-support mpi-default-bin
  numba-doc ocl-icd-libopencl1 openmpi-common proj-data
  python-babel-localedata python-matplotlib-data python-odf-doc
  python-odf-tools python-tables-data python3-appdirs python3-attr
  python3-babel python3-beniget python3-bottleneck python3-brotli python3-bs4
  python3-chardet python3-cycler python3-dateutil python3-decorator
  python3-defusedxml python3-et-xmlfile python3-fonttools python3-fs
  python3-gast python3-h5py python3-h5py-serial python3-html5lib
  python3-iniconfig python3-jdcal python3-jinja2 python3-kiwisolver
  python3-llvmlite python3-lxml python3-lz4 python3-markupsafe
  python3-matplotlib python3-mpi4py python3-mpmath python3-numba
  python3-numexpr python3-numpy python3-odf python3-olefile python3-openpyxl
  python3-packaging python3-pandas python3-pandas-lib python3-pil
  python3-pil.imagetk python3-pluggy python3-ply python3-py python3-pydot
  python3-pygments python3-pytest python3-pythran python3-scipy
  python3-soupsieve python3-sympy python3-tables python3-tables-lib python3-tk
  python3-toml python3-tz python3-ufolib2 python3-unicodedata2
  python3-webencodings python3-xlwt sphinx-rtd-theme-common tk8.6-blt2.5
  unicode-data x11-common
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc gettext blt-demo cython-doc flit
  python3-build python3-tomli python3-installer gfortran-multilib gfortran-doc
  gfortran-11-multilib gfortran-11-doc gsfonts graphviz-doc libboost-doc
  libboost1.74-doc libboost-atomic1.74-dev libboost-chrono1.74-dev
  libboost-container1.74-dev libboost-context1.74-dev
  libboost-contract1.74-dev libboost-coroutine1.74-dev
  libboost-date-time1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev
  libboost-filesystem1.74-dev libboost-graph1.74-dev
  libboost-graph-parallel1.74-dev libboost-iostreams1.74-dev
  libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev
  libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev
  libboost-program-options1.74-dev libboost-python1.74-dev
  libboost-random1.74-dev libboost-regex1.74-dev
  libboost-serialization1.74-dev libboost-stacktrace1.74-dev
  libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev
  libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev
  libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev
  libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev
  librtmp-dev libssh2-1-dev pkg-config libgdal-doc gmp-doc libgmp10-doc
  libmpfr-dev gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html
  libhdf5-doc libhwloc-contrib-plugins icu-doc libjs-jquery-ui-docs
  liblcms2-utils libtool-doc liblzma-doc ncurses-doc libomp-14-doc openmpi-doc
  pciutils sqlite3-doc libssl-doc tcl8.6 tk8.6 gcj-jdk libxsimd-doc
  llvm-11-doc m4-doc opencl-icd python-attr-doc python-bottleneck-doc
  python-cycler-doc python-h5py-doc python3-genshi python-jinja2-doc
  llvmlite-doc python-lxml-doc dvipng ffmpeg fonts-staypuft ghostscript
  gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python-matplotlib-doc
  python3-cairocffi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip
  python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc
  python3-gmpy2 nvidia-cuda-toolkit python-numpy-doc python-pandas-doc
  python3-statsmodels python-pil-doc python-ply-doc subversion
  python-pygments-doc ttf-bitstream-vera python-scipy-doc texlive-fonts-extra
  python-sympy-doc python3-netcdf4 python-tables-doc vitables tix
  python3-tk-dbg python3-xlrd python-xlrt-doc
The following NEW packages will be installed:
  autoconf automake autotools-dev binfmt-support blt cython3 dh-python file
  fontconfig fonts-font-awesome fonts-lato fonts-liberation fonts-lyx gfortran
  gfortran-11 graphviz hdf5-helpers ibverbs-providers icu-devtools jq
  libaec-dev libaec0 libann0 libblas3 libblosc1 libboost-dev libboost1.74-dev
  libcaf-openmpi-3 libcairo2 libcdt5 libcgraph6 libclang-cpp11 libcoarrays-dev
  libcoarrays-openmpi-dev libcurl4-gnutls-dev libdatrie1 libdeflate-dev
  libevent-2.1-7 libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7
  libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libfabric1 libffi-dev
  libgeos-c1v5 libgeos-dev libgeos3.10.2 libgfortran-11-dev libgfortran5
  libgmp-dev libgmpxx4ldbl libgraphite2-3 libgsl-dev libgsl27 libgslcblas0
  libgts-0.7-5 libgts-bin libgvc6 libgvpr2 libharfbuzz0b libhdf5-103-1
  libhdf5-cpp-103-1 libhdf5-dev libhdf5-fortran-102 libhdf5-hl-100
  libhdf5-hl-cpp-100 libhdf5-hl-fortran-100 libhwloc-dev libhwloc-plugins
  libhwloc15 libibverbs-dev libibverbs1 libice6 libicu-dev libimagequant0
  libjbig-dev libjpeg-dev libjpeg-turbo8-dev libjpeg8-dev libjq1
  libjs-jquery-ui liblab-gamut1 liblapack3 liblbfgsb0 liblcms2-2 libllvm11
  libllvm14 libltdl-dev libltdl7 liblzf1 liblzma-dev liblzo2-2 libmagic-mgc
  libmagic1 libncurses-dev libnl-3-200 libnl-3-dev libnl-route-3-200
  libnl-route-3-dev libnuma-dev libnuma1 libomp-14-dev libomp-dev libomp5-14
  libonig5 libopenblas-dev libopenblas-pthread-dev libopenblas0
  libopenblas0-pthread libopenjp2-7 libopenmpi-dev libopenmpi3 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpciaccess0 libpfm4
  libpipeline1 libpixman-1-0 libpmix-dev libpmix2 libproj-dev libproj22
  libpsm-infinipath1 libpsm2-2 libqhull-r8.0 libraqm0 librdmacm1 libsigsegv2
  libsm6 libsnappy1v5 libsqlite3-dev libssl-dev libsz2 libtbb12 libtbbmalloc2
  libtcl8.6 libthai-data libthai0 libtiff-dev libtiffxx5 libtinfo-dev libtk8.6
  libtool libucx0 libwebpdemux2 libwebpmux3 libxaw7 libxcb-render0 libxcb-shm0
  libxft2 libxml2-dev libxmu6 libxnvctrl0 libxrender1 libxsimd-dev libxslt1.1
  libxss1 libxt6 libz3-4 libz3-dev llvm-11 llvm-11-dev llvm-11-linker-tools
  llvm-11-runtime llvm-11-tools m4 mailcap mime-support mpi-default-bin nest
  numba-doc ocl-icd-libopencl1 openmpi-bin openmpi-common proj-bin proj-data
  python-babel-localedata python-matplotlib-data python-odf-doc
  python-odf-tools python-tables-data python3-appdirs python3-attr
  python3-babel python3-beniget python3-bottleneck python3-brotli python3-bs4
  python3-chardet python3-cycler python3-dateutil python3-decorator
  python3-defusedxml python3-et-xmlfile python3-fonttools python3-fs
  python3-gast python3-h5py python3-h5py-serial python3-html5lib
  python3-iniconfig python3-jdcal python3-jinja2 python3-kiwisolver
  python3-llvmlite python3-lxml python3-lz4 python3-markupsafe
  python3-matplotlib python3-mpi4py python3-mpmath python3-numba
  python3-numexpr python3-numpy python3-odf python3-olefile python3-openpyxl
  python3-packaging python3-pandas python3-pandas-lib python3-pil
  python3-pil.imagetk python3-pluggy python3-ply python3-py python3-pydot
  python3-pygments python3-pytest python3-pythran python3-scipy
  python3-soupsieve python3-sympy python3-tables python3-tables-lib python3-tk
  python3-toml python3-tz python3-ufolib2 python3-unicodedata2
  python3-webencodings python3-xlwt sphinx-rtd-theme-common tk8.6-blt2.5
  unicode-data x11-common
0 upgraded, 248 newly installed, 0 to remove and 3 not upgraded.
Need to get 322 MB of archives.
After this operation, 1616 MB of additional disk space will be used.
Get:1 https://ppa.launchpadcontent.net/nest-simulator/nest/ubuntu jammy/main amd64 nest amd64 3.7-2ubuntu1ppa1-1641~202404150721~ubuntu22.04.1 [53.2 MB]
Get:2 http://archive.ubuntu.com/ubuntu jammy/main amd64 fonts-lato all 2.0-2.1 [2696 kB]
Get:3 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libmagic-mgc amd64 1:5.41-3ubuntu0.1 [257 kB]
Get:4 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libmagic1 amd64 1:5.41-3ubuntu0.1 [87.2 kB]
Get:5 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 file amd64 1:5.41-3ubuntu0.1 [21.5 kB]
Get:6 http://archive.ubuntu.com/ubuntu jammy/main amd64 libnuma1 amd64 2.0.14-3ubuntu2 [22.5 kB]
Get:7 http://archive.ubuntu.com/ubuntu jammy/main amd64 libpipeline1 amd64 1.5.5-1 [23.5 kB]
Get:8 http://archive.ubuntu.com/ubuntu jammy/main amd64 libsigsegv2 amd64 2.13-1ubuntu3 [14.6 kB]
Get:9 http://archive.ubuntu.com/ubuntu jammy/main amd64 m4 amd64 1.4.18-5ubuntu2 [199 kB]
Get:10 http://archive.ubuntu.com/ubuntu jammy/main amd64 autoconf all 2.71-2 [338 kB]
Get:11 http://archive.ubuntu.com/ubuntu jammy/main amd64 autotools-dev all 20220109.1 [44.9 kB]
Get:12 http://archive.ubuntu.com/ubuntu jammy/main amd64 automake all 1:1.16.5-1.3 [558 kB]
Get:13 http://archive.ubuntu.com/ubuntu jammy/main amd64 binfmt-support amd64 2.2.1-2 [55.8 kB]
Get:14 http://archive.ubuntu.com/ubuntu jammy/main amd64 libtcl8.6 amd64 8.6.12+dfsg-1build1 [990 kB]
Get:15 http://archive.ubuntu.com/ubuntu jammy/main amd64 libxrender1 amd64 1:0.9.10-1build4 [19.7 kB]
Get:16 http://archive.ubuntu.com/ubuntu jammy/main amd64 libxft2 amd64 2.3.4-1 [41.8 kB]
Get:17 http://archive.ubuntu.com/ubuntu jammy/main amd64 x11-common all 1:7.7+23ubuntu2 [23.4 kB]
Get:18 http://archive.ubuntu.com/ubuntu jammy/main amd64 libxss1 amd64 1:1.2.3-1build2 [8476 B]
Get:19 http://archive.ubuntu.com/ubuntu jammy/main amd64 libtk8.6 amd64 8.6.12-1build1 [784 kB]
Get:20 http://archive.ubuntu.com/ubuntu jammy/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4.1build2 [643 kB]
Get:21 http://archive.ubuntu.com/ubuntu jammy/main amd64 blt amd64 2.5.3+dfsg-4.1build2 [4838 B]
Get:22 http://archive.ubuntu.com/ubuntu jammy/universe amd64 cython3 amd64 0.29.28-1ubuntu3 [1336 kB]
Get:23 http://archive.ubuntu.com/ubuntu jammy/universe amd64 dh-python all 5.20220403 [106 kB]
Get:24 http://archive.ubuntu.com/ubuntu jammy/main amd64 fontconfig amd64 2.13.1-4.2ubuntu5 [177 kB]
Get:25 http://archive.ubuntu.com/ubuntu jammy/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [516 kB]
Get:26 http://archive.ubuntu.com/ubuntu jammy/main amd64 fonts-liberation all 1:1.07.4-11 [822 kB]
Get:27 http://archive.ubuntu.com/ubuntu jammy/universe amd64 fonts-lyx all 2.3.6-1 [159 kB]
Get:28 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libgfortran5 amd64 12.3.0-1ubuntu1~22.04 [879 kB]
Get:29 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libgfortran-11-dev amd64 11.4.0-1ubuntu1~22.04 [842 kB]
Get:30 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 gfortran-11 amd64 11.4.0-1ubuntu1~22.04 [11.2 MB]
Get:31 http://archive.ubuntu.com/ubuntu jammy/main amd64 gfortran amd64 4:11.2.0-1ubuntu1 [1182 B]
Get:32 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libann0 amd64 1.1.2+doc-7build1 [26.0 kB]
Get:33 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libcdt5 amd64 2.42.2-6 [21.1 kB]
Get:34 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libcgraph6 amd64 2.42.2-6 [45.8 kB]
Get:35 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgts-0.7-5 amd64 0.7.6+darcs121130-5 [164 kB]
Get:36 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libpixman-1-0 amd64 0.40.0-1ubuntu0.22.04.1 [264 kB]
Get:37 http://archive.ubuntu.com/ubuntu jammy/main amd64 libxcb-render0 amd64 1.14-3ubuntu3 [16.4 kB]
Get:38 http://archive.ubuntu.com/ubuntu jammy/main amd64 libxcb-shm0 amd64 1.14-3ubuntu3 [5780 B]
Get:39 http://archive.ubuntu.com/ubuntu jammy/main amd64 libcairo2 amd64 1.16.0-5ubuntu2 [628 kB]
Get:40 http://archive.ubuntu.com/ubuntu jammy/main amd64 libltdl7 amd64 2.4.6-15build2 [39.6 kB]
Get:41 http://archive.ubuntu.com/ubuntu jammy/main amd64 libgraphite2-3 amd64 1.3.14-1build2 [71.3 kB]
Get:42 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libharfbuzz0b amd64 2.7.4-1ubuntu3.1 [352 kB]
Get:43 http://archive.ubuntu.com/ubuntu jammy/main amd64 libthai-data all 0.1.29-1build1 [162 kB]
Get:44 http://archive.ubuntu.com/ubuntu jammy/main amd64 libdatrie1 amd64 0.2.13-2 [19.9 kB]
Get:45 http://archive.ubuntu.com/ubuntu jammy/main amd64 libthai0 amd64 0.1.29-1build1 [19.2 kB]
Get:46 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 libpango-1.0-0 amd64 1.50.6+ds-2ubuntu1 [230 kB]
Get:47 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 libpangoft2-1.0-0 amd64 1.50.6+ds-2ubuntu1 [54.0 kB]
Get:48 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 libpangocairo-1.0-0 amd64 1.50.6+ds-2ubuntu1 [39.8 kB]
Get:49 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libpathplan4 amd64 2.42.2-6 [23.5 kB]
Get:50 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgvc6 amd64 2.42.2-6 [726 kB]
Get:51 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgvpr2 amd64 2.42.2-6 [191 kB]
Get:52 http://archive.ubuntu.com/ubuntu jammy/universe amd64 liblab-gamut1 amd64 2.42.2-6 [1964 kB]
Get:53 http://archive.ubuntu.com/ubuntu jammy/main amd64 libice6 amd64 2:1.0.10-1build2 [42.6 kB]
Get:54 http://archive.ubuntu.com/ubuntu jammy/main amd64 libsm6 amd64 2:1.2.3-1build2 [16.7 kB]
Get:55 http://archive.ubuntu.com/ubuntu jammy/main amd64 libxt6 amd64 1:1.2.1-1 [177 kB]
Get:56 http://archive.ubuntu.com/ubuntu jammy/main amd64 libxmu6 amd64 2:1.1.3-3 [49.6 kB]
Get:57 http://archive.ubuntu.com/ubuntu jammy/main amd64 libxaw7 amd64 2:1.0.14-1 [191 kB]
Get:58 http://archive.ubuntu.com/ubuntu jammy/universe amd64 graphviz amd64 2.42.2-6 [650 kB]
Get:59 http://archive.ubuntu.com/ubuntu jammy/universe amd64 hdf5-helpers amd64 1.10.7+repack-4ubuntu2 [14.2 kB]
Get:60 http://archive.ubuntu.com/ubuntu jammy/main amd64 libnl-3-200 amd64 3.5.0-0.1 [59.1 kB]
Get:61 http://archive.ubuntu.com/ubuntu jammy/main amd64 libnl-route-3-200 amd64 3.5.0-0.1 [180 kB]
Get:62 http://archive.ubuntu.com/ubuntu jammy/main amd64 libibverbs1 amd64 39.0-1 [69.3 kB]
Get:63 http://archive.ubuntu.com/ubuntu jammy/main amd64 ibverbs-providers amd64 39.0-1 [341 kB]
Get:64 http://archive.ubuntu.com/ubuntu jammy/main amd64 icu-devtools amd64 70.1-2 [197 kB]
Get:65 http://archive.ubuntu.com/ubuntu jammy/main amd64 libonig5 amd64 6.9.7.1-2build1 [172 kB]
Get:66 http://archive.ubuntu.com/ubuntu jammy/main amd64 libjq1 amd64 1.6-2.1ubuntu3 [133 kB]
Get:67 http://archive.ubuntu.com/ubuntu jammy/main amd64 jq amd64 1.6-2.1ubuntu3 [52.5 kB]
Get:68 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libaec0 amd64 1.0.6-1 [20.1 kB]
Get:69 http://archive.ubuntu.com/ubuntu jammy/main amd64 libblas3 amd64 3.10.0-2ubuntu1 [228 kB]
Get:70 http://archive.ubuntu.com/ubuntu jammy/main amd64 libsnappy1v5 amd64 1.1.8-1build3 [17.5 kB]
Get:71 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libblosc1 amd64 1.21.1+ds2-2 [35.8 kB]
Get:72 http://archive.ubuntu.com/ubuntu jammy/main amd64 libboost1.74-dev amd64 1.74.0-14ubuntu3 [9609 kB]
Get:73 http://archive.ubuntu.com/ubuntu jammy/main amd64 libboost-dev amd64 1.74.0.3ubuntu7 [3490 B]
Get:74 http://archive.ubuntu.com/ubuntu jammy/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-1build3 [93.9 kB]
Get:75 http://archive.ubuntu.com/ubuntu jammy/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-1build3 [7642 B]
Get:76 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.1 [170 kB]
Get:77 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libpsm2-2 amd64 11.2.185-1 [182 kB]
Get:78 http://archive.ubuntu.com/ubuntu jammy/main amd64 librdmacm1 amd64 39.0-1 [71.2 kB]
Get:79 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libfabric1 amd64 1.11.0-3 [558 kB]
Get:80 http://archive.ubuntu.com/ubuntu jammy-updates/universe amd64 libhwloc15 amd64 2.7.0-2ubuntu1 [159 kB]
Get:81 http://archive.ubuntu.com/ubuntu jammy/main amd64 libpciaccess0 amd64 0.16-3 [19.1 kB]
Get:82 http://archive.ubuntu.com/ubuntu jammy/main amd64 libxnvctrl0 amd64 510.47.03-0ubuntu1 [11.5 kB]
Get:83 http://archive.ubuntu.com/ubuntu jammy/universe amd64 ocl-icd-libopencl1 amd64 2.2.14-3 [39.1 kB]
Get:84 http://archive.ubuntu.com/ubuntu jammy-updates/universe amd64 libhwloc-plugins amd64 2.7.0-2ubuntu1 [15.6 kB]
Get:85 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libpmix2 amd64 4.1.2-2ubuntu1 [604 kB]
Get:86 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libucx0 amd64 1.12.1~rc2-1 [891 kB]
Get:87 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libopenmpi3 amd64 4.1.2-2ubuntu1 [2594 kB]
Get:88 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libcaf-openmpi-3 amd64 2.9.2-3 [36.5 kB]
Get:89 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libllvm11 amd64 1:11.1.0-6 [19.6 MB]
Get:90 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libclang-cpp11 amd64 1:11.1.0-6 [10.5 MB]
Get:91 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libcoarrays-dev amd64 2.9.2-3 [40.5 kB]
Get:92 http://archive.ubuntu.com/ubuntu jammy/universe amd64 openmpi-common all 4.1.2-2ubuntu1 [162 kB]
Get:93 http://archive.ubuntu.com/ubuntu jammy/universe amd64 openmpi-bin amd64 4.1.2-2ubuntu1 [116 kB]
Get:94 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libcoarrays-openmpi-dev amd64 2.9.2-3 [452 kB]
Get:95 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libcurl4-gnutls-dev amd64 7.81.0-1ubuntu1.16 [379 kB]
Get:96 http://archive.ubuntu.com/ubuntu jammy/main amd64 libdeflate-dev amd64 1.10-2 [59.2 kB]
Get:97 http://archive.ubuntu.com/ubuntu jammy/main amd64 libevent-2.1-7 amd64 2.1.12-stable-1build3 [148 kB]
Get:98 http://archive.ubuntu.com/ubuntu jammy/main amd64 libevent-extra-2.1-7 amd64 2.1.12-stable-1build3 [65.4 kB]
Get:99 http://archive.ubuntu.com/ubuntu jammy/main amd64 libevent-openssl-2.1-7 amd64 2.1.12-stable-1build3 [15.8 kB]
Get:100 http://archive.ubuntu.com/ubuntu jammy/main amd64 libevent-dev amd64 2.1.12-stable-1build3 [278 kB]
Get:101 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgeos3.10.2 amd64 3.10.2-1 [713 kB]
Get:102 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgeos-c1v5 amd64 3.10.2-1 [82.5 kB]
Get:103 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgeos-dev amd64 3.10.2-1 [46.6 kB]
Get:104 http://archive.ubuntu.com/ubuntu jammy/main amd64 libgmpxx4ldbl amd64 2:6.2.1+dfsg-3ubuntu1 [9580 B]
Get:105 http://archive.ubuntu.com/ubuntu jammy/main amd64 libgmp-dev amd64 2:6.2.1+dfsg-3ubuntu1 [337 kB]
Get:106 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgslcblas0 amd64 2.7.1+dfsg-3 [94.4 kB]
Get:107 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgsl27 amd64 2.7.1+dfsg-3 [1000 kB]
Get:108 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgsl-dev amd64 2.7.1+dfsg-3 [1257 kB]
Get:109 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libgts-bin amd64 0.7.6+darcs121130-5 [44.3 kB]
Get:110 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libsz2 amd64 1.0.6-1 [5354 B]
Get:111 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-103-1 amd64 1.10.7+repack-4ubuntu2 [1295 kB]
Get:112 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-cpp-103-1 amd64 1.10.7+repack-4ubuntu2 [129 kB]
Get:113 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-fortran-102 amd64 1.10.7+repack-4ubuntu2 [90.9 kB]
Get:114 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-hl-100 amd64 1.10.7+repack-4ubuntu2 [59.1 kB]
Get:115 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-hl-fortran-100 amd64 1.10.7+repack-4ubuntu2 [33.8 kB]
Get:116 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-hl-cpp-100 amd64 1.10.7+repack-4ubuntu2 [10.6 kB]
Get:117 http://archive.ubuntu.com/ubuntu jammy/main amd64 libjpeg-turbo8-dev amd64 2.1.2-0ubuntu1 [257 kB]
Get:118 http://archive.ubuntu.com/ubuntu jammy/main amd64 libjpeg8-dev amd64 8c-2ubuntu10 [1476 B]
Get:119 http://archive.ubuntu.com/ubuntu jammy/main amd64 libjpeg-dev amd64 8c-2ubuntu10 [1472 B]
Get:120 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libaec-dev amd64 1.0.6-1 [17.9 kB]
Get:121 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libssl-dev amd64 3.0.2-0ubuntu1.15 [2376 kB]
Get:122 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libhdf5-dev amd64 1.10.7+repack-4ubuntu2 [2684 kB]
Get:123 http://archive.ubuntu.com/ubuntu jammy/main amd64 libicu-dev amd64 70.1-2 [11.6 MB]
Get:124 http://archive.ubuntu.com/ubuntu jammy/main amd64 libimagequant0 amd64 2.17.0-1 [34.6 kB]
Get:125 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libjs-jquery-ui all 1.13.1+dfsg-1 [253 kB]
Get:126 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libopenblas0-pthread amd64 0.3.20+ds-1 [6803 kB]
Get:127 http://archive.ubuntu.com/ubuntu jammy/main amd64 liblapack3 amd64 3.10.0-2ubuntu1 [2504 kB]
Get:128 http://archive.ubuntu.com/ubuntu jammy/universe amd64 liblbfgsb0 amd64 3.0+dfsg.3-10 [29.9 kB]
Get:129 http://archive.ubuntu.com/ubuntu jammy/main amd64 liblcms2-2 amd64 2.12~rc1-2build2 [159 kB]
Get:130 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libllvm14 amd64 1:14.0.0-1ubuntu1.1 [24.0 MB]
Get:131 http://archive.ubuntu.com/ubuntu jammy/main amd64 libltdl-dev amd64 2.4.6-15build2 [169 kB]
Get:132 http://archive.ubuntu.com/ubuntu jammy/universe amd64 liblzf1 amd64 3.6-3 [7444 B]
Get:133 http://archive.ubuntu.com/ubuntu jammy/main amd64 liblzo2-2 amd64 2.10-2build3 [53.7 kB]
Get:134 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libncurses-dev amd64 6.3-2ubuntu0.1 [381 kB]
Get:135 http://archive.ubuntu.com/ubuntu jammy/main amd64 libnl-3-dev amd64 3.5.0-0.1 [101 kB]
Get:136 http://archive.ubuntu.com/ubuntu jammy/main amd64 libnl-route-3-dev amd64 3.5.0-0.1 [202 kB]
Get:137 http://archive.ubuntu.com/ubuntu jammy-security/universe amd64 libomp5-14 amd64 1:14.0.0-1ubuntu1.1 [389 kB]
Get:138 http://archive.ubuntu.com/ubuntu jammy-security/universe amd64 libomp-14-dev amd64 1:14.0.0-1ubuntu1.1 [347 kB]
Get:139 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libopenblas0 amd64 0.3.20+ds-1 [6098 B]
Get:140 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libopenblas-pthread-dev amd64 0.3.20+ds-1 [4634 kB]
Get:141 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libopenblas-dev amd64 0.3.20+ds-1 [18.6 kB]
Get:142 http://archive.ubuntu.com/ubuntu jammy/main amd64 libnuma-dev amd64 2.0.14-3ubuntu2 [35.9 kB]
Get:143 http://archive.ubuntu.com/ubuntu jammy-updates/universe amd64 libhwloc-dev amd64 2.7.0-2ubuntu1 [256 kB]
Get:144 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libpmix-dev amd64 4.1.2-2ubuntu1 [805 kB]
Get:145 http://archive.ubuntu.com/ubuntu jammy/universe amd64 proj-data all 8.2.1-1 [10.0 MB]
Get:146 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libproj22 amd64 8.2.1-1 [1257 kB]
Get:147 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libqhull-r8.0 amd64 2020.2-4 [196 kB]
Get:148 http://archive.ubuntu.com/ubuntu jammy/main amd64 libraqm0 amd64 0.7.0-4ubuntu1 [11.7 kB]
Get:149 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libsqlite3-dev amd64 3.37.2-2ubuntu0.3 [846 kB]
Get:150 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libtbbmalloc2 amd64 2021.5.0-7ubuntu2 [49.6 kB]
Get:151 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libtbb12 amd64 2021.5.0-7ubuntu2 [84.8 kB]
Get:152 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libjbig-dev amd64 2.1-3.1ubuntu0.22.04.1 [27.4 kB]
Get:153 http://archive.ubuntu.com/ubuntu jammy/main amd64 liblzma-dev amd64 5.2.5-2ubuntu1 [159 kB]
Get:154 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libtiffxx5 amd64 4.3.0-6ubuntu0.9 [5726 B]
Get:155 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libtiff-dev amd64 4.3.0-6ubuntu0.9 [316 kB]
Get:156 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libtinfo-dev amd64 6.3-2ubuntu0.1 [780 B]
Get:157 http://archive.ubuntu.com/ubuntu jammy/main amd64 libtool all 2.4.6-15build2 [164 kB]
Get:158 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libwebpdemux2 amd64 1.2.2-2ubuntu0.22.04.2 [9964 B]
Get:159 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libwebpmux3 amd64 1.2.2-2ubuntu0.22.04.2 [20.5 kB]
Get:160 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libxml2-dev amd64 2.9.13+dfsg-1ubuntu0.4 [804 kB]
Get:161 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libxsimd-dev amd64 7.6.0-2 [108 kB]
Get:162 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 libxslt1.1 amd64 1.1.34-4ubuntu0.22.04.1 [164 kB]
Get:163 http://archive.ubuntu.com/ubuntu jammy/universe amd64 llvm-11-runtime amd64 1:11.1.0-6 [186 kB]
Get:164 http://archive.ubuntu.com/ubuntu jammy/universe amd64 llvm-11-linker-tools amd64 1:11.1.0-6 [1275 kB]
Get:165 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 libpfm4 amd64 4.11.1+git32-gd0b85fb-1ubuntu0.1 [345 kB]
Get:166 http://archive.ubuntu.com/ubuntu jammy/universe amd64 llvm-11 amd64 1:11.1.0-6 [9118 kB]
Get:167 http://archive.ubuntu.com/ubuntu jammy/main amd64 libffi-dev amd64 3.4.2-4 [63.7 kB]
Get:168 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-pygments all 2.11.2+dfsg-2 [750 kB]
Get:169 http://archive.ubuntu.com/ubuntu jammy/universe amd64 llvm-11-tools amd64 1:11.1.0-6 [359 kB]
Get:170 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libz3-4 amd64 4.8.12-1 [5766 kB]
Get:171 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libz3-dev amd64 4.8.12-1 [72.2 kB]
Get:172 http://archive.ubuntu.com/ubuntu jammy/universe amd64 llvm-11-dev amd64 1:11.1.0-6 [29.9 MB]
Get:173 http://archive.ubuntu.com/ubuntu jammy/main amd64 mailcap all 3.70+nmu1ubuntu1 [23.8 kB]
Get:174 http://archive.ubuntu.com/ubuntu jammy/main amd64 mime-support all 3.66 [3696 B]
Get:175 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 python3-numpy amd64 1:1.21.5-1ubuntu22.04.1 [3467 kB]
Get:176 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-dateutil all 2.8.1-6 [78.4 kB]
Get:177 http://archive.ubuntu.com/ubuntu jammy-updates/main amd64 python3-tz all 2022.1-1ubuntu0.22.04.1 [30.7 kB]
Get:178 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-pandas-lib amd64 1.3.5+dfsg-3 [3735 kB]
Get:179 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-pandas all 1.3.5+dfsg-3 [2680 kB]
Get:180 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-decorator all 4.4.2-0ubuntu1 [10.3 kB]
Get:181 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-gast all 0.5.2-2 [9394 B]
Get:182 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-beniget all 0.4.1-2 [9904 B]
Get:183 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-ply all 3.11-5 [47.5 kB]
Get:184 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-pythran amd64 0.10.0+ds2-1 [423 kB]
Get:185 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-scipy amd64 1.8.0-1exp2ubuntu1 [14.7 MB]
Get:186 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python-matplotlib-data all 3.5.1-2build1 [2942 kB]
Get:187 http://archive.ubuntu.com/ubuntu jammy/main amd64 libopenjp2-7 amd64 2.4.0-6 [158 kB]
Get:188 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 python3-pil amd64 9.0.1-1ubuntu0.3 [419 kB]
Get:189 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 python3-tk amd64 3.10.8-1~22.04 [110 kB]
Get:190 http://archive.ubuntu.com/ubuntu jammy-security/universe amd64 python3-pil.imagetk amd64 9.0.1-1ubuntu0.3 [9616 B]
Get:191 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-cycler all 0.11.0-1 [8156 B]
Get:192 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-brotli amd64 1.0.9-2build6 [319 kB]
Get:193 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-attr all 21.2.0-1 [44.0 kB]
Get:194 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-ufolib2 all 0.13.1+dfsg1-1 [32.2 kB]
Get:195 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-mpmath all 1.2.1-2 [419 kB]
Get:196 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-sympy all 1.9-1 [4312 kB]
Get:197 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-appdirs all 1.4.4-2 [11.4 kB]
Get:198 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-fs all 2.4.12-1 [84.9 kB]
Get:199 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-lxml amd64 4.8.0-1build1 [1150 kB]
Get:200 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-lz4 amd64 3.1.3+dfsg-1build3 [33.3 kB]
Get:201 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-unicodedata2 amd64 14.0.0+ds-8 [376 kB]
Get:202 http://archive.ubuntu.com/ubuntu jammy/universe amd64 unicode-data all 14.0.0-1.1 [8206 kB]
Get:203 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-fonttools amd64 4.29.1-2build1 [810 kB]
Get:204 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-kiwisolver amd64 1.3.2-1build1 [48.0 kB]
Get:205 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-packaging all 21.3-1 [30.7 kB]
Get:206 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-matplotlib amd64 3.5.1-2build1 [5937 kB]
Get:207 http://archive.ubuntu.com/ubuntu jammy/universe amd64 mpi-default-bin amd64 1.14 [2898 B]
Get:208 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-mpi4py amd64 3.1.3-1build2 [465 kB]
Get:209 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-h5py-serial amd64 3.6.0-2build1 [872 kB]
Get:210 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-h5py all 3.6.0-2build1 [4740 B]
Get:211 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-pydot all 1.4.2-1build1 [25.8 kB]
Get:212 http://archive.ubuntu.com/ubuntu jammy/main amd64 sphinx-rtd-theme-common all 1.0.0+dfsg-1 [991 kB]
Get:213 http://archive.ubuntu.com/ubuntu jammy/universe amd64 numba-doc all 0.55.1-0ubuntu2 [737 kB]
Get:214 http://archive.ubuntu.com/ubuntu jammy/main amd64 python-babel-localedata all 2.8.0+dfsg.1-7 [4982 kB]
Get:215 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python-odf-doc all 1.4.2-1 [222 kB]
Get:216 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-defusedxml all 0.7.1-1 [43.2 kB]
Get:217 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-odf all 1.4.2-1 [79.3 kB]
Get:218 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python-odf-tools all 1.4.2-1 [27.3 kB]
Get:219 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python-tables-data all 3.7.0-2build1 [47.6 kB]
Get:220 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-babel all 2.8.0+dfsg.1-7 [85.1 kB]
Get:221 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-bottleneck amd64 1.3.2+ds1-2build1 [82.9 kB]
Get:222 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-soupsieve all 2.3.1-1 [33.0 kB]
Get:223 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-bs4 all 4.10.0-2 [79.1 kB]
Get:224 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-chardet all 4.0.0-1 [98.0 kB]
Get:225 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-et-xmlfile all 1.0.1-2.1 [9224 B]
Get:226 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-webencodings all 0.5.1-4 [11.8 kB]
Get:227 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-html5lib all 1.1-3 [87.0 kB]
Get:228 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-iniconfig all 1.1.1-2 [6024 B]
Get:229 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-jdcal all 1.0-1.3 [7944 B]
Get:230 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-markupsafe amd64 2.0.1-2build1 [12.7 kB]
Get:231 http://archive.ubuntu.com/ubuntu jammy-security/main amd64 python3-jinja2 all 3.0.3-1ubuntu0.2 [108 kB]
Get:232 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-llvmlite amd64 0.38.0-1 [126 kB]
Get:233 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-numba amd64 0.55.1-0ubuntu2 [1588 kB]
Get:234 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-numexpr amd64 2.8.1-1build1 [86.0 kB]
Get:235 http://archive.ubuntu.com/ubuntu jammy/main amd64 python3-olefile all 0.46-3 [33.8 kB]
Get:236 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-openpyxl all 3.0.9-1 [148 kB]
Get:237 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-pluggy all 0.13.0-7.1 [19.0 kB]
Get:238 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-py all 1.10.0-1 [71.9 kB]
Get:239 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-toml all 0.10.2-1 [16.5 kB]
Get:240 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-pytest all 6.2.5-1ubuntu2 [214 kB]
Get:241 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-tables-lib amd64 3.7.0-2build1 [427 kB]
Get:242 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-tables all 3.7.0-2build1 [333 kB]
Get:243 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-xlwt all 1.3.0-3 [83.7 kB]
Get:244 http://archive.ubuntu.com/ubuntu jammy/main amd64 libibverbs-dev amd64 39.0-1 [628 kB]
Get:245 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libomp-dev amd64 1:14.0-55~exp2 [3074 B]
Get:246 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libopenmpi-dev amd64 4.1.2-2ubuntu1 [867 kB]
Get:247 http://archive.ubuntu.com/ubuntu jammy/universe amd64 libproj-dev amd64 8.2.1-1 [1594 kB]
Get:248 http://archive.ubuntu.com/ubuntu jammy/universe amd64 proj-bin amd64 8.2.1-1 [154 kB]
debconf: unable to initialize frontend: Dialog
debconf: (Dialog frontend will not work on a dumb terminal, an emacs shell buffer, or without a controlling terminal.)
debconf: falling back to frontend: Readline
debconf: unable to initialize frontend: Readline
debconf: (This frontend requires a controlling tty.)
debconf: falling back to frontend: Teletype
dpkg-preconfigure: unable to re-open stdin: 
Fetched 322 MB in 12s (27.9 MB/s)
Selecting previously unselected package fonts-lato.

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update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode

Setting up libgvc6 (2.42.2-6) ...

Setting up graphviz (2.42.2-6) ...

Setting up libfabric1:amd64 (1.11.0-3) ...

Setting up python3-pydot (1.4.2-1build1) ...

Setting up libopenmpi3:amd64 (4.1.2-2ubuntu1) ...

Setting up libcaf-openmpi-3:amd64 (2.9.2-3) ...

Setting up openmpi-bin (4.1.2-2ubuntu1) ...

update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode

update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode

Setting up mpi-default-bin (1.14) ...

Setting up python3-mpi4py (3.1.3-1build2) ...

Setting up libcoarrays-openmpi-dev:amd64 (2.9.2-3) ...

update-alternatives: using /usr/lib/x86_64-linux-gnu/open-coarrays/openmpi/bin/caf to provide /usr/bin/caf.openmpi (caf-openmpi) in auto mode

update-alternatives: using /usr/bin/caf.openmpi to provide /usr/bin/caf (caf) in auto mode

Setting up libopenmpi-dev:amd64 (4.1.2-2ubuntu1) ...

update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode

Setting up python3-fonttools (4.29.1-2build1) ...

Setting up python3-ufolib2 (0.13.1+dfsg1-1) ...

Setting up python3-matplotlib (3.5.1-2build1) ...

Setting up nest (3.7-2ubuntu1ppa1-1641~202404150721~ubuntu22.04.1) ...

Processing triggers for libc-bin (2.35-0ubuntu3.8) ...

+ sudo apt install -y python3-pip python3-tk libigraph-dev python3-cairo python3-cairocffi

WARNING: apt does not have a stable CLI interface. Use with caution in scripts.

Reading package lists...
Building dependency tree...
Reading state information...
python3-tk is already the newest version (3.10.8-1~22.04).
python3-tk set to manually installed.
python3-pip is already the newest version (22.0.2+dfsg-1ubuntu0.4).
The following additional packages will be installed:
  libamd2 libarpack2 libcolamd2 libcxsparse3 libgdk-pixbuf-2.0-0
  libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-common libglpk40 libigraph2 libplfit0
  libsuitesparseconfig5 python3-cffi python3-pycparser python3-xcffib
Suggested packages:
  libiodbc2-dev default-libmysqlclient-dev libigraph-doc pkg-config plfit
  plfit-doc python-cairocffi-doc
The following NEW packages will be installed:
  libamd2 libarpack2 libcolamd2 libcxsparse3 libgdk-pixbuf-2.0-0
  libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-common libglpk40 libigraph-dev
  libigraph2 libplfit0 libsuitesparseconfig5 python3-cairo python3-cairocffi
  python3-cffi python3-pycparser python3-xcffib
0 upgraded, 17 newly installed, 0 to remove and 3 not upgraded.
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Get:16 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-xcffib all 0.11.1-2 [63.3 kB]
Get:17 http://archive.ubuntu.com/ubuntu jammy/universe amd64 python3-cairocffi all 1.2.0-2 [70.3 kB]
debconf: unable to initialize frontend: Dialog
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Setting up libgdk-pixbuf2.0-common (2.42.8+dfsg-1ubuntu0.3) ...

Setting up libarpack2:amd64 (3.8.0-1) ...

Setting up python3-pycparser (2.21-1) ...

Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.8+dfsg-1ubuntu0.3) ...

Setting up libcxsparse3:amd64 (1:5.10.1+dfsg-4build1) ...

Setting up libplfit0:amd64 (0.9.3+ds-1ubuntu1) ...

Setting up libsuitesparseconfig5:amd64 (1:5.10.1+dfsg-4build1) ...

Setting up libamd2:amd64 (1:5.10.1+dfsg-4build1) ...

Setting up libcolamd2:amd64 (1:5.10.1+dfsg-4build1) ...

Setting up python3-cffi (1.15.0-1build2) ...

Setting up libglpk40:amd64 (5.0-1) ...

Setting up libigraph2:amd64 (0.9.6+ds-2ubuntu1) ...

Setting up python3-xcffib (0.11.1-2) ...

Setting up libgdk-pixbuf2.0-bin (2.42.8+dfsg-1ubuntu0.3) ...

Setting up libigraph-dev:amd64 (0.9.6+ds-2ubuntu1) ...

Setting up python3-cairocffi (1.2.0-2) ...

Processing triggers for libc-bin (2.35-0ubuntu3.8) ...

+ pip install --upgrade 'numpy<2' scipy 'cython<3.0.9' mpi4py
Collecting numpy<2
  Downloading numpy-1.26.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (18.2 MB)
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Collecting scipy
  Downloading scipy-1.13.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (38.6 MB)
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Collecting cython<3.0.9
  Downloading Cython-3.0.8-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (3.6 MB)
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Collecting mpi4py
  Downloading mpi4py-3.1.6.tar.gz (2.4 MB)
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  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: mpi4py
  Building wheel for mpi4py (pyproject.toml): started
  Building wheel for mpi4py (pyproject.toml): finished with status 'done'
  Created wheel for mpi4py: filename=mpi4py-3.1.6-cp310-cp310-linux_x86_64.whl size=2746366 sha256=b96c663ccef26816ef0093ae31f096af66e7c5f1c362d601617d4588565ddb9a
  Stored in directory: /home/build/.cache/pip/wheels/4c/ca/89/8fc1fb1c620afca13bb41c630b1f948bbf446e0aaa4b762e10
Successfully built mpi4py
Installing collected packages: numpy, mpi4py, cython, scipy
Successfully installed cython-3.0.8 mpi4py-3.1.6 numpy-1.26.4 scipy-1.13.1
+ pip install --upgrade 'networkx>=2.4' python-igraph
Collecting networkx>=2.4
  Downloading networkx-3.3-py3-none-any.whl (1.7 MB)
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Collecting python-igraph
  Downloading python_igraph-0.11.5-py3-none-any.whl (9.1 kB)
Collecting igraph==0.11.5
  Downloading igraph-0.11.5-cp39-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (3.3 MB)
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Collecting texttable>=1.6.2
  Downloading texttable-1.7.0-py2.py3-none-any.whl (10 kB)
Installing collected packages: texttable, networkx, igraph, python-igraph
Successfully installed igraph-0.11.5 networkx-3.3 python-igraph-0.11.5 texttable-1.7.0
+ pip install --upgrade 'matplotlib>=3.6' seaborn shapely svg.path dxfgrabber cartopy geopandas descartes lxml
Collecting matplotlib>=3.6
  Downloading matplotlib-3.9.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (8.3 MB)
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Collecting seaborn
  Downloading seaborn-0.13.2-py3-none-any.whl (294 kB)
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Collecting shapely
  Downloading shapely-2.0.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (2.5 MB)
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Collecting svg.path
  Downloading svg.path-6.3-py2.py3-none-any.whl (16 kB)
Collecting dxfgrabber
  Downloading dxfgrabber-1.0.1-py2.py3-none-any.whl (34 kB)
Collecting cartopy
  Downloading Cartopy-0.23.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (11.6 MB)
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Collecting geopandas
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Collecting descartes
  Downloading descartes-1.1.0-py3-none-any.whl (5.8 kB)
Collecting lxml
  Downloading lxml-5.2.2-cp310-cp310-manylinux_2_28_x86_64.whl (5.0 MB)
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Collecting fonttools>=4.22.0
  Downloading fonttools-4.53.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.6 MB)
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Collecting cycler>=0.10
  Downloading cycler-0.12.1-py3-none-any.whl (8.3 kB)
Collecting contourpy>=1.0.1
  Downloading contourpy-1.2.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (305 kB)
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Collecting kiwisolver>=1.3.1
  Downloading kiwisolver-1.4.5-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (1.6 MB)
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Requirement already satisfied: numpy>=1.23 in ./.nngt_env/lib/python3.10/site-packages (from matplotlib>=3.6) (1.26.4)
Collecting pyparsing>=2.3.1
  Downloading pyparsing-3.1.2-py3-none-any.whl (103 kB)
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Collecting python-dateutil>=2.7
  Downloading python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
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Collecting pillow>=8
  Downloading pillow-10.3.0-cp310-cp310-manylinux_2_28_x86_64.whl (4.5 MB)
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Collecting packaging>=20.0
  Downloading packaging-24.1-py3-none-any.whl (53 kB)
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Collecting pandas>=1.2
  Downloading pandas-2.2.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (13.0 MB)
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Collecting pyshp>=2.3
  Downloading pyshp-2.3.1-py2.py3-none-any.whl (46 kB)
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Collecting pyproj>=3.3.1
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Collecting fiona>=1.8.21
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Collecting certifi
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Collecting cligj>=0.5
  Downloading cligj-0.7.2-py3-none-any.whl (7.1 kB)
Collecting six
  Downloading six-1.16.0-py2.py3-none-any.whl (11 kB)
Collecting click~=8.0
  Downloading click-8.1.7-py3-none-any.whl (97 kB)
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Collecting click-plugins>=1.0
  Downloading click_plugins-1.1.1-py2.py3-none-any.whl (7.5 kB)
Collecting tzdata>=2022.7
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Collecting pytz>=2020.1
  Downloading pytz-2024.1-py2.py3-none-any.whl (505 kB)
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Installing collected packages: pytz, dxfgrabber, tzdata, svg.path, six, shapely, pyshp, pyparsing, pillow, packaging, lxml, kiwisolver, fonttools, cycler, contourpy, click, certifi, attrs, python-dateutil, pyproj, cligj, click-plugins, pandas, matplotlib, fiona, seaborn, geopandas, descartes, cartopy
Successfully installed attrs-23.2.0 cartopy-0.23.0 certifi-2024.6.2 click-8.1.7 click-plugins-1.1.1 cligj-0.7.2 contourpy-1.2.1 cycler-0.12.1 descartes-1.1.0 dxfgrabber-1.0.1 fiona-1.9.6 fonttools-4.53.0 geopandas-0.14.4 kiwisolver-1.4.5 lxml-5.2.2 matplotlib-3.9.0 packaging-24.1 pandas-2.2.2 pillow-10.3.0 pyparsing-3.1.2 pyproj-3.6.1 pyshp-2.3.1 python-dateutil-2.9.0.post0 pytz-2024.1 seaborn-0.13.2 shapely-2.0.4 six-1.16.0 svg.path-6.3 tzdata-2024.1
+ pip install --upgrade pytest pytest-mpi cov-core coverage 'coveralls[yaml]'
Collecting pytest
  Downloading pytest-8.2.2-py3-none-any.whl (339 kB)
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Collecting pytest-mpi
  Downloading pytest_mpi-0.6-py2.py3-none-any.whl (5.9 kB)
Collecting cov-core
  Downloading cov-core-1.15.0.tar.gz (5.9 kB)
  Preparing metadata (setup.py): started
  Preparing metadata (setup.py): finished with status 'done'
Collecting coverage
  Downloading coverage-7.5.3-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (231 kB)
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Collecting coveralls[yaml]
  Downloading coveralls-4.0.1-py3-none-any.whl (13 kB)
Collecting tomli>=1
  Downloading tomli-2.0.1-py3-none-any.whl (12 kB)
Collecting pluggy<2.0,>=1.5
  Downloading pluggy-1.5.0-py3-none-any.whl (20 kB)
Collecting exceptiongroup>=1.0.0rc8
  Downloading exceptiongroup-1.2.1-py3-none-any.whl (16 kB)
Requirement already satisfied: packaging in ./.nngt_env/lib/python3.10/site-packages (from pytest) (24.1)
Collecting iniconfig
  Downloading iniconfig-2.0.0-py3-none-any.whl (5.9 kB)
Collecting requests<3.0.0,>=1.0.0
  Downloading requests-2.32.3-py3-none-any.whl (64 kB)
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Collecting docopt<0.7.0,>=0.6.1
  Downloading docopt-0.6.2.tar.gz (25 kB)
  Preparing metadata (setup.py): started
  Preparing metadata (setup.py): finished with status 'done'
Collecting pyyaml<7.0,>=3.10
  Downloading PyYAML-6.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (705 kB)
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Collecting urllib3<3,>=1.21.1
  Downloading urllib3-2.2.2-py3-none-any.whl (121 kB)
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Collecting charset-normalizer<4,>=2
  Downloading charset_normalizer-3.3.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
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Collecting idna<4,>=2.5
  Downloading idna-3.7-py3-none-any.whl (66 kB)
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Requirement already satisfied: certifi>=2017.4.17 in ./.nngt_env/lib/python3.10/site-packages (from requests<3.0.0,>=1.0.0->coveralls[yaml]) (2024.6.2)
Using legacy 'setup.py install' for cov-core, since package 'wheel' is not installed.
Using legacy 'setup.py install' for docopt, since package 'wheel' is not installed.
Installing collected packages: docopt, urllib3, tomli, pyyaml, pluggy, iniconfig, idna, exceptiongroup, coverage, charset-normalizer, requests, pytest, cov-core, pytest-mpi, coveralls
  Running setup.py install for docopt: started
  Running setup.py install for docopt: finished with status 'done'
  Running setup.py install for cov-core: started
  Running setup.py install for cov-core: finished with status 'done'
Successfully installed charset-normalizer-3.3.2 cov-core-1.15.0 coverage-7.5.3 coveralls-4.0.1 docopt-0.6.2 exceptiongroup-1.2.1 idna-3.7 iniconfig-2.0.0 pluggy-1.5.0 pytest-8.2.2 pytest-mpi-0.6 pyyaml-6.0.1 requests-2.32.3 tomli-2.0.1 urllib3-2.2.2
+ mv .coveralls.yml NNGT/.coveralls.yml
+ cd NNGT
+ pip install .
Processing /home/build/NNGT
  Installing build dependencies: started
  Installing build dependencies: finished with status 'done'
  Getting requirements to build wheel: started
  Getting requirements to build wheel: finished with status 'done'
  Preparing metadata (pyproject.toml): started
  Preparing metadata (pyproject.toml): finished with status 'done'
Requirement already satisfied: numpy>=1.17 in /home/build/.nngt_env/lib/python3.10/site-packages (from NNGT==2.7.3) (1.26.4)
Requirement already satisfied: scipy>=0.11 in /home/build/.nngt_env/lib/python3.10/site-packages (from NNGT==2.7.3) (1.13.1)
Collecting platformdirs
  Downloading platformdirs-4.2.2-py3-none-any.whl (18 kB)
Requirement already satisfied: cython in /home/build/.nngt_env/lib/python3.10/site-packages (from NNGT==2.7.3) (3.0.8)
Building wheels for collected packages: NNGT
  Building wheel for NNGT (pyproject.toml): started
  Building wheel for NNGT (pyproject.toml): finished with status 'done'
  Created wheel for NNGT: filename=NNGT-2.7.3-cp310-cp310-linux_x86_64.whl size=1617145 sha256=b6137a5d19e408778f085d2e78ff3494c6efe6dc04df3b8637b1c31ee0eda830
  Stored in directory: /tmp/pip-ephem-wheel-cache-acy2vf66/wheels/92/fa/40/bf3cd25b985bea2c1c5a04b1b799a3c432eded83a10407205a
Successfully built NNGT
Installing collected packages: platformdirs, NNGT
Successfully installed NNGT-2.7.3 platformdirs-4.2.2
+ echo 'export PATH=/home/build/.local/bin:$PATH'
+ python3 setup.py build
Compiling ./nngt/generation/cconnect.pyx because it changed.
[1/1] Cythonizing ./nngt/generation/cconnect.pyx
running build
running build_ext
building 'nngt.generation.cconnect' extension
creating build/temp.linux-x86_64-3.10
creating build/temp.linux-x86_64-3.10/nngt
creating build/temp.linux-x86_64-3.10/nngt/generation
x86_64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./nngt/generation -I./nngt/generation/ -I/home/build/.nngt_env/lib/python3.10/site-packages/numpy/core/include -I/home/build/.nngt_env/include -I/usr/include/python3.10 -c ./nngt/generation/cconnect.cpp -o build/temp.linux-x86_64-3.10/./nngt/generation/cconnect.o -DNPY_NO_DEPRECATED_API=NPY_1_9_API_VERSION -std=c++14 -Wno-cpp -Wno-unused-function -ffast-math -msse -ftree-vectorize -O2 -g -fopenmp
x86_64-linux-gnu-gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I./nngt/generation -I./nngt/generation/ -I/home/build/.nngt_env/lib/python3.10/site-packages/numpy/core/include -I/home/build/.nngt_env/include -I/usr/include/python3.10 -c ./nngt/generation/func_connect.cpp -o build/temp.linux-x86_64-3.10/./nngt/generation/func_connect.o -DNPY_NO_DEPRECATED_API=NPY_1_9_API_VERSION -std=c++14 -Wno-cpp -Wno-unused-function -ffast-math -msse -ftree-vectorize -O2 -g -fopenmp
creating build/lib.linux-x86_64-3.10
creating build/lib.linux-x86_64-3.10/nngt
creating build/lib.linux-x86_64-3.10/nngt/generation
x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/./nngt/generation/cconnect.o build/temp.linux-x86_64-3.10/./nngt/generation/func_connect.o -L./nngt/generation/ -lgomp -o build/lib.linux-x86_64-3.10/nngt/generation/cconnect.cpython-310-x86_64-linux-gnu.so -fopenmp
test
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+ cd NNGT
+ GL=all
+ coverage run -p -m pytest testing/library_compatibility.py --backends=networkx,igraph
============================= test session starts ==============================
platform linux -- Python 3.10.12, pytest-8.2.2, pluggy-1.5.0
rootdir: /home/build/NNGT
configfile: pyproject.toml
plugins: mpi-0.6
collected 11 items

testing/library_compatibility.py ...........                             [100%]

=============================== warnings summary ===============================
testing/library_compatibility.py::test_binary_shortest_paths
  /home/build/NNGT/nngt/analysis/ig_functions.py:351: RuntimeWarning: Couldn't reach some vertices at src/paths/unweighted.c:444
    path = graph.get_shortest_paths(source, target, mode="out", weights=w)[0]

testing/library_compatibility.py::test_weighted_shortest_paths
  /home/build/NNGT/nngt/analysis/ig_functions.py:351: RuntimeWarning: Couldn't reach some vertices. at src/paths/dijkstra.c:534
    path = graph.get_shortest_paths(source, target, mode="out", weights=w)[0]

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
======================== 11 passed, 2 warnings in 0.71s ========================
+ GL=nx
+ coverage run -p -m pytest testing
============================= test session starts ==============================
platform linux -- Python 3.10.12, pytest-8.2.2, pluggy-1.5.0
rootdir: /home/build/NNGT
configfile: pyproject.toml
plugins: mpi-0.6
collected 91 items

testing/test_analysis.py ..........                                      [ 10%]
testing/test_attributes.py ...........                                   [ 23%]
testing/test_basics.py .............                                     [ 37%]
testing/test_connect_group_type.py ...                                   [ 40%]
testing/test_examples.py sss                                             [ 43%]
testing/test_gallery.py ..                                               [ 46%]
testing/test_generation.py .                                             [ 47%]
testing/test_generation2.py ...s.......                                  [ 59%]
testing/test_graphclasses.py ....                                        [ 63%]
testing/test_group_pop.py .....                                          [ 69%]
testing/test_io.py ........                                              [ 78%]
testing/test_mpi.py s                                                    [ 79%]
testing/test_nest.py ss                                                  [ 81%]
testing/test_plots.py ........                                           [ 90%]
testing/test_random.py ..                                                [ 92%]
testing/test_rewire.py .....                                             [ 97%]
testing/test_weights.py ..                                               [100%]

=============================== warnings summary ===============================
testing/test_plots.py::test_draw_network_options
  /home/build/NNGT/nngt/plot/plt_networks.py:717: UserWarning: This figure includes Axes that are not compatible with tight_layout, so results might be incorrect.
    plt.tight_layout()

testing/test_plots.py::test_draw_network_options
  /home/build/.nngt_env/lib/python3.10/site-packages/scipy/sparse/_index.py:151: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
    self._set_arrayXarray(i, j, x)

testing/test_plots.py::test_library_plot
  /home/build/NNGT/nngt/plot/plt_networks.py:1230: RuntimeWarning: More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`). Consider using `matplotlib.pyplot.close()`.
    fig, axis = plt.subplots(figsize=size_inches)

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
============ 84 passed, 7 skipped, 3 warnings in 197.08s (0:03:17) =============
+ GL=ig
+ coverage run -p -m pytest testing
============================= test session starts ==============================
platform linux -- Python 3.10.12, pytest-8.2.2, pluggy-1.5.0
rootdir: /home/build/NNGT
configfile: pyproject.toml
plugins: mpi-0.6
collected 91 items

testing/test_analysis.py ..........                                      [ 10%]
testing/test_attributes.py ...........                                   [ 23%]
testing/test_basics.py .............                                     [ 37%]
testing/test_connect_group_type.py ...                                   [ 40%]
testing/test_examples.py sss                                             [ 43%]
testing/test_gallery.py ..                                               [ 46%]
testing/test_generation.py .                                             [ 47%]
testing/test_generation2.py ...s.......                                  [ 59%]
testing/test_graphclasses.py ....                                        [ 63%]
testing/test_group_pop.py .....                                          [ 69%]
testing/test_io.py ........                                              [ 78%]
testing/test_mpi.py s                                                    [ 79%]
testing/test_nest.py ss                                                  [ 81%]
testing/test_plots.py ........                                           [ 90%]
testing/test_random.py ..                                                [ 92%]
testing/test_rewire.py .....                                             [ 97%]
testing/test_weights.py ..                                               [100%]

=============================== warnings summary ===============================
testing/test_plots.py::test_draw_network_options
  /home/build/NNGT/nngt/plot/plt_networks.py:717: UserWarning: This figure includes Axes that are not compatible with tight_layout, so results might be incorrect.
    plt.tight_layout()

testing/test_plots.py::test_draw_network_options
  /home/build/.nngt_env/lib/python3.10/site-packages/scipy/sparse/_index.py:151: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
    self._set_arrayXarray(i, j, x)

testing/test_plots.py::test_library_plot
  /home/build/NNGT/nngt/plot/plt_networks.py:1230: RuntimeWarning: More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`). Consider using `matplotlib.pyplot.close()`.
    fig, axis = plt.subplots(figsize=size_inches)

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================== 84 passed, 7 skipped, 3 warnings in 35.24s ==================
+ GL=nngt
+ coverage run -p -m pytest testing
============================= test session starts ==============================
platform linux -- Python 3.10.12, pytest-8.2.2, pluggy-1.5.0
rootdir: /home/build/NNGT
configfile: pyproject.toml
plugins: mpi-0.6
collected 91 items

testing/test_analysis.py ........s.                                      [ 10%]
testing/test_attributes.py ...........                                   [ 23%]
testing/test_basics.py .............                                     [ 37%]
testing/test_connect_group_type.py ...                                   [ 40%]
testing/test_examples.py sss                                             [ 43%]
testing/test_gallery.py ..                                               [ 46%]
testing/test_generation.py .                                             [ 47%]
testing/test_generation2.py ...s.......                                  [ 59%]
testing/test_graphclasses.py ....                                        [ 63%]
testing/test_group_pop.py .....                                          [ 69%]
testing/test_io.py ........                                              [ 78%]
testing/test_mpi.py s                                                    [ 79%]
testing/test_nest.py ss                                                  [ 81%]
testing/test_plots.py .....s..                                           [ 90%]
testing/test_random.py ..                                                [ 92%]
testing/test_rewire.py .....                                             [ 97%]
testing/test_weights.py ..                                               [100%]

=============================== warnings summary ===============================
testing/test_plots.py::test_draw_network_options
  /home/build/NNGT/nngt/plot/plt_networks.py:717: UserWarning: This figure includes Axes that are not compatible with tight_layout, so results might be incorrect.
    plt.tight_layout()

testing/test_plots.py::test_draw_network_options
  /home/build/.nngt_env/lib/python3.10/site-packages/scipy/sparse/_index.py:151: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
    self._set_arrayXarray(i, j, x)

testing/test_plots.py::test_library_plot
  /home/build/NNGT/nngt/plot/plt_networks.py:1230: RuntimeWarning: More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`). Consider using `matplotlib.pyplot.close()`.
    fig, axis = plt.subplots(figsize=size_inches)

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
================== 82 passed, 9 skipped, 3 warnings in 31.67s ==================
+ GL=ig
+ OMP=2
+ PYNEST_QUIET=1
+ coverage run -p -m pytest testing
============================= test session starts ==============================
platform linux -- Python 3.10.12, pytest-8.2.2, pluggy-1.5.0
rootdir: /home/build/NNGT
configfile: pyproject.toml
plugins: mpi-0.6
collected 91 items

testing/test_analysis.py ..........                                      [ 10%]
testing/test_attributes.py ...........                                   [ 23%]
testing/test_basics.py .............                                     [ 37%]
testing/test_connect_group_type.py ...                                   [ 40%]
testing/test_examples.py ...                                             [ 43%]
testing/test_gallery.py ..                                               [ 46%]
testing/test_generation.py .                                             [ 47%]
testing/test_generation2.py ...s.......                                  [ 59%]
testing/test_graphclasses.py ....                                        [ 63%]
testing/test_group_pop.py .....                                          [ 69%]
testing/test_io.py ........                                              [ 78%]
testing/test_mpi.py s                                                    [ 79%]
testing/test_nest.py ss                                                  [ 81%]
testing/test_plots.py ........                                           [ 90%]
testing/test_random.py ..                                                [ 92%]
testing/test_rewire.py .....                                             [ 97%]
testing/test_weights.py ..                                               [100%]

=============================== warnings summary ===============================
testing/test_examples.py::test_example_graph_struct
  /home/build/.nngt_env/lib/python3.10/site-packages/matplotlib/collections.py:996: RuntimeWarning: invalid value encountered in sqrt
    scale = np.sqrt(self._sizes) * dpi / 72.0 * self._factor

testing/test_examples.py::test_example_graph_struct
  /home/build/.nngt_env/lib/python3.10/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/110m_cultural/ne_110m_admin_0_countries.zip
    warnings.warn(f'Downloading: {url}', DownloadWarning)

testing/test_examples.py::test_example_graph_struct
  /home/build/.nngt_env/lib/python3.10/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/50m_cultural/ne_50m_admin_0_countries.zip
    warnings.warn(f'Downloading: {url}', DownloadWarning)

testing/test_examples.py::test_example_graph_struct
  /home/build/.nngt_env/lib/python3.10/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/10m_cultural/ne_10m_admin_0_map_units.zip
    warnings.warn(f'Downloading: {url}', DownloadWarning)

testing/test_examples.py::test_example_graph_struct
  /home/build/.nngt_env/lib/python3.10/site-packages/cartopy/io/__init__.py:241: DownloadWarning: Downloading: https://naturalearth.s3.amazonaws.com/10m_cultural/ne_10m_populated_places_simple.zip
    warnings.warn(f'Downloading: {url}', DownloadWarning)

testing/test_examples.py::test_examples
  /home/build/NNGT/nngt/plot/plt_networks.py:184: RuntimeWarning: More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`). Consider using `matplotlib.pyplot.close()`.
    fig = plt.figure(facecolor='white', figsize=size_inches,

testing/test_plots.py::test_draw_network_options
  /home/build/NNGT/nngt/plot/plt_networks.py:717: UserWarning: This figure includes Axes that are not compatible with tight_layout, so results might be incorrect.
    plt.tight_layout()

testing/test_plots.py::test_draw_network_options
  /home/build/.nngt_env/lib/python3.10/site-packages/scipy/sparse/_index.py:151: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient.
    self._set_arrayXarray(i, j, x)

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
============ 87 passed, 4 skipped, 8 warnings in 105.22s (0:01:45) =============
+ GL=nx
+ OMP=0
+ MPI=1
+ mpirun -n 2 coverage run -p -m pytest --with-mpi testing
============================= test session starts ==============================
platform linux -- Python 3.10.12, pytest-8.2.2, pluggy-1.5.0
============================= test session starts ==============================
platform linux -- Python 3.10.12, pytest-8.2.2, pluggy-1.5.0
rootdir: /home/build/NNGT
configfile: pyproject.toml
plugins: mpi-0.6
collecting ... rootdir: /home/build/NNGT
configfile: pyproject.toml
plugins: mpi-0.6
collecting ... 
collected 91 items                                                             
collected 91 items                                                             



testing/test_analysis.py testing/test_analysis.py sssssssssssssssssss                                      [ 10%]
testing/test_attributes.py s                                      [ 10%]
testing/test_attributes.py ssss.......sssss                                   [ 23%]
testing/test_basics.py .sssss                                   [ 23%]
testing/test_basics.py ..ssssss..ss......ssss.s                                     [ 37%].
testing/test_connect_group_type.py sss                                     [ 37%]
testing/test_connect_group_type.py ss.                                   [ 40%]
testing/test_examples.py sss                                             [ 43%]
testing/test_gallery.py ss                                               [ 46%]
testing/test_generation.py s                                             [ 47%]
testing/test_generation2.py sss.                                   [ 40%]
testing/test_examples.py sss                                             [ 43%]
testing/test_gallery.py ss                                               [ 46%]
testing/test_generation.py s                                             [ 47%]
testing/test_generation2.py sss..ssssssssssssss                                  [ 59%]
testing/test_graphclasses.py                                   [ 59%]
testing/test_graphclasses.py sssssss                                        [ 63%]
testing/test_group_pop.py s.                                        [ 63%]
testing/test_group_pop.py ......s.                                          [ 69%]
testing/test_io.py ss                                          [ 69%]
testing/test_io.py ssssssssssss                                              [ 78%]
testing/test_mpi.py sss                                              [ 78%]
testing/test_mpi.py .                                                    [ 79%]
testing/test_nest.py ss                                                  [ 81%]
testing/test_plots.py ssssssss                                           [ 90%]
testing/test_random.py .                                                    [ 79%]
testing/test_nest.py ss                                                  [ 81%]
testing/test_plots.py ssssssss                                           [ 90%]
testing/test_random.py ...                                                [ 92%]
testing/test_rewire.py sssss                                             [ 97%]
testing/test_weights.py s.                                               [100%]
=============================== MPI Information ================================
rank: 1
size: 2
MPI version: 3.1
MPI library version: Open MPI v4.1.2, package: Debian OpenMPI, ident: 4.1.2, repo rev: v4.1.2, Nov 24, 2021
MPI vendor: Open MPI 4.1.2
mpi4py rc: 
mpi4py config:
 mpicc: /usr/bin/mpicc
 mpicxx: /usr/bin/mpicxx
 mpifort: /usr/bin/mpifort
 mpif90: /usr/bin/mpif90
 mpif77: /usr/bin/mpif77

======================= 20 passed, 71 skipped in 25.86s ========================
.                                                [ 92%]
testing/test_rewire.py sssss                                             [ 97%]
testing/test_weights.py s.                                               [100%]
=============================== MPI Information ================================
rank: 0
size: 2
MPI version: 3.1
MPI library version: Open MPI v4.1.2, package: Debian OpenMPI, ident: 4.1.2, repo rev: v4.1.2, Nov 24, 2021
MPI vendor: Open MPI 4.1.2
mpi4py rc: 
mpi4py config:
 mpicc: /usr/bin/mpicc
 mpicxx: /usr/bin/mpicxx
 mpifort: /usr/bin/mpifort
 mpif90: /usr/bin/mpif90
 mpif77: /usr/bin/mpif77

======================= 20 passed, 71 skipped in 25.87s ========================
+ coverage combine
Combined data file .coverage.build.6997.XqAlfUix
Combined data file .coverage.build.7020.XcDgWnox
Combined data file .coverage.build.7034.XnVFIFmx
Combined data file .coverage.build.7046.XpBKMBsx
Combined data file .coverage.build.7058.XeVXekxx
Combined data file .coverage.build.7074.XIOqeHhx
Combined data file .coverage.build.7075.XVRCopOx
++ git show -s --pretty=%D HEAD
++ grep -v HEAD
++ tr -s ', /' '\n'
++ sed -n 2p
+ GIT_BRANCH=numpy2
+ CI_NAME=git.sr.ht
+ CI_BUILD_NUMBER=1257690
+ CI_BUILD_URL=https://builds.sr.ht/~tfardet/job/1257690
+ CI_BRANCH=numpy2
+ coveralls
Submitting coverage to coveralls.io...
Coverage submitted!
Job #1257690.1
https://coveralls.io/jobs/145097453
doc
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+ cd NNGT
++ git show -s --pretty=%D HEAD
++ sed -n 2p
++ grep -v HEAD
++ tr -s ', /' '\n'
+ GIT_BRANCH=numpy2
+ set +x
Build complete: success 4 months ago (took 10 minutes)