#86544 success

92e55c3 — hrbrmstr

new srht build

Owner
~hrbrmstr
Created
1 year, 6 months ago
Updated
1 year, 6 months ago
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Setting up libtext-unidecode-perl (1.30-1) ...
Setting up libfile-homedir-perl (1.004-1) ...
Setting up python3-lib2to3 (3.7.3-1) ...
Setting up node-normalize.css (8.0.1-3) ...
Setting up libdrm-common (2.4.97-1) ...
Setting up libxcomposite1:amd64 (1:0.4.4-2) ...
Setting up libsys-hostname-long-perl (1.5-1) ...
Setting up fonts-adf-gillius (0.20110505-3) ...
Setting up libicu-dev:amd64 (63.1-6) ...
Setting up ruby-xmlrpc (0.3.0-2) ...
Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ...
Setting up fonts-noto-core (20181227-1) ...
Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-1) ...
Setting up xdg-utils (1.1.3-1) ...
Setting up liburi-perl (1.76-1) ...
Setting up libx11-protocol-perl (0.56-7) ...
Setting up xbitmaps (1.1.1-2) ...
Setting up libjs-bootstrap (3.4.1+dfsg-1) ...
Setting up libsynctex2:amd64 (2018.20181218.49446-1) ...
Setting up libtiffxx5:amd64 (4.0.10-4) ...
Setting up libaprutil1:amd64 (1.6.1-4) ...
Setting up libbz2-dev:amd64 (1.0.6-9.1) ...
Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1) ...
Setting up libxkbcommon0:amd64 (0.8.2-1) ...
Setting up libpotrace0:amd64 (1.15-1) ...
Setting up libwayland-client0:amd64 (1.16.0-1) ...
Setting up libnet-ssleay-perl (1.85-2+b1) ...
Setting up python3-distutils (3.7.3-1) ...
Setting up x11proto-dev (2018.4-4) ...
Setting up libfile-stripnondeterminism-perl (1.1.2-1) ...
Setting up libglib2.0-dev-bin (2.58.3-2) ...
Setting up glib-networking-services (2.58.0-2) ...
Setting up fonts-noto-hinted (20181227-1) ...
Setting up libblkid-dev:amd64 (2.33.1-0.1) ...
Setting up libgfortran-8-dev:amd64 (8.3.0-6) ...
Setting up libice6:amd64 (2:1.0.9-2) ...
Setting up libhttp-date-perl (6.02-1) ...
Setting up pandoc-citeproc (0.14.3.1-4+b3) ...
Setting up tcl8.6 (8.6.9+dfsg-2) ...
Setting up libfile-basedir-perl (0.08-1) ...
Setting up libxdamage1:amd64 (1:1.1.4-3+b3) ...
Setting up libfile-listing-perl (6.04-1) ...
Setting up libxau-dev:amd64 (1:1.0.8-1+b2) ...
Setting up libwoff1:amd64 (1.0.2-1) ...
Setting up libice-dev:amd64 (2:1.0.9-2) ...
Setting up libpng-tools (1.6.36-6) ...
Setting up libtool (2.4.6-9) ...
Setting up libpcre3-dev:amd64 (2:8.39-12) ...
Setting up fontconfig-config (2.13.1-2) ...
Setting up libxtst6:amd64 (2:1.2.3-1) ...
Setting up gfortran-8 (8.3.0-6) ...
Setting up libfribidi-dev:amd64 (1.0.5-3.1) ...
Setting up preview-latex-style (11.91-2) ...
Setting up tcl8.6-dev:amd64 (8.6.9+dfsg-2) ...
Setting up libxcursor1:amd64 (1:1.1.15-2) ...
Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4) ...
Setting up libpng-dev:amd64 (1.6.36-6) ...
Setting up libserf-1-1:amd64 (1.3.9-7+b10) ...
Setting up libavahi-common3:amd64 (0.7-4+b1) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up libjbig-dev:amd64 (2.1-3.1+b2) ...
Setting up libglib2.0-bin (2.58.3-2) ...
Setting up libnet-http-perl (6.18-1) ...
Setting up m4 (1.4.18-2) ...
Setting up dconf-service (0.30.1-2) ...
Setting up libnss3:amd64 (2:3.42.1-1) ...
Setting up libexception-class-perl (1.44-1) ...
Setting up libclass-c3-perl (0.34-1) ...
Setting up nodejs (10.15.2~dfsg-2) ...
update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode
Setting up libdevel-callchecker-perl (0.008-1) ...
Setting up libxml-sax-perl (1.00+dfsg-1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...

Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up gfortran (4:8.3.0-1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up fonts-lobstertwo (2.0-2) ...
Setting up libjs-jquery-datatables (1.10.19+dfsg-1) ...
Setting up libjson-glib-1.0-0:amd64 (1.4.4-2) ...
Setting up libmail-sendmail-perl (0.80-1) ...
Setting up libatk-bridge2.0-0:amd64 (2.30.0-5) ...
Setting up libthai0:amd64 (0.1.28-2) ...
Setting up libxdmcp-dev:amd64 (1:1.1.2-3) ...
Setting up freetype2-doc (2.9.1-3) ...
Setting up libxml2-dev:amd64 (2.9.4+dfsg1-7+b3) ...
Setting up libblas3:amd64 (3.8.0-2) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
Setting up gdb (8.2.1-2) ...
Setting up libjs-jquery-ui (1.12.1+dfsg-5) ...
Setting up libptexenc1:amd64 (2018.20181218.49446-1) ...
Setting up pandoc (2.2.1-3+b2) ...
Setting up libfreetype6:amd64 (2.9.1-3) ...
Setting up libtiff-dev:amd64 (4.0.10-4) ...
Setting up libcurl4-openssl-dev:amd64 (7.64.0-4) ...
Setting up x11proto-core-dev (2018.4-4) ...
Setting up shared-mime-info (1.10-1) ...
Setting up x11proto-input-dev (2018.4-4) ...
Setting up libdata-optlist-perl (0.110-1) ...
Setting up libcroco3:amd64 (0.6.12-3) ...
Setting up gir1.2-glib-2.0:amd64 (1.58.3-2) ...
Setting up libfile-desktopentry-perl (0.22-1) ...
Setting up autoconf (2.69-11) ...
Setting up libxml-libxml-perl (2.0134+dfsg-1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50...
update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Setting up libwww-robotrules-perl (6.02-1) ...
Setting up x11proto-xext-dev (2018.4-4) ...
Setting up libdrm2:amd64 (2.4.97-1) ...
Setting up at-spi2-core (2.30.0-7) ...
Setting up groff-base (1.22.4-3) ...
Setting up libwayland-cursor0:amd64 (1.16.0-1) ...
Setting up libhtml-parser-perl (3.72-3+b3) ...
Setting up tcl (8.6.9+1) ...
Setting up bison (2:3.3.2.dfsg-1) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up libharfbuzz0b:amd64 (2.3.1-1) ...
Setting up libfontconfig1:amd64 (2.13.1-2) ...
Setting up libmro-compat-perl (0.13-1) ...
Setting up libsvn1:amd64 (1.10.4-1) ...
Setting up x11proto-scrnsaver-dev (2018.4-4) ...
Setting up libsm6:amd64 (2:1.2.3-1) ...
Setting up libxfont2:amd64 (1:2.0.3-1) ...
Setting up libavahi-client3:amd64 (0.7-4+b1) ...
Setting up libmount-dev:amd64 (2.33.1-0.1) ...
Setting up libio-socket-ssl-perl (2.060-3) ...
Setting up libblas-dev:amd64 (3.8.0-2) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode
Setting up libsub-exporter-perl (0.987-1) ...
Setting up libhttp-message-perl (6.18-1) ...
Setting up libeval-closure-perl (0.14-1) ...
Setting up libdrm-amdgpu1:amd64 (2.4.97-1) ...
Setting up libhtml-form-perl (6.03-1) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-mimeinfo-perl (0.29-1) ...
Setting up node-highlight.js (9.12.0+dfsg1-4) ...
Setting up libhttp-negotiate-perl (6.01-1) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up libparams-validationcompiler-perl (0.30-1) ...
Setting up liblapack3:amd64 (3.8.0-2) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
Setting up libxft2:amd64 (2.3.2-2) ...
Setting up libdrm-nouveau2:amd64 (2.4.97-1) ...
Setting up gettext (0.19.8.1-9) ...
Setting up libharfbuzz-icu0:amd64 (2.3.1-1) ...
Setting up libxcb1-dev:amd64 (1.13.1-2) ...
Setting up dconf-gsettings-backend:amd64 (0.30.1-2) ...
Setting up libhttp-cookies-perl (6.04-1) ...
Setting up libsombok3:amd64 (2.4.0-2) ...
Setting up libsm-dev:amd64 (2:1.2.3-1) ...
Setting up libselinux1-dev:amd64 (2.8-1+b1) ...
Setting up libdrm-radeon1:amd64 (2.4.97-1) ...
Setting up libhtml-tree-perl (5.07-2) ...
Setting up libtk8.6:amd64 (8.6.9-2) ...
Setting up libparams-classify-perl (0.015-1+b1) ...
Setting up libpango-1.0-0:amd64 (1.42.4-6) ...
Setting up libdrm-intel1:amd64 (2.4.97-1) ...
Setting up libgl1-mesa-dri:amd64 (18.3.6-2) ...
Setting up subversion (1.10.4-1) ...
Setting up libx11-dev:amd64 (2:1.6.7-1) ...
Setting up libtiff5-dev (4.0.10-4) ...
Setting up libhtml-format-perl (2.12-1) ...
Setting up fonts-sil-gentiumplus-compact (5.000-2) ...
Setting up libharfbuzz-gobject0:amd64 (2.3.1-1) ...
Setting up xfonts-utils (1:7.7+6) ...
Setting up man-db (2.8.5-2) ...
Building database of manual pages ...
Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer.
man-db.service is a disabled or a static unit, not starting it.
Setting up gir1.2-harfbuzz-0.0:amd64 (2.3.1-1) ...
Setting up libcairo2:amd64 (1.16.0-4) ...
Setting up libfreetype6-dev:amd64 (2.9.1-3) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libxcb-shm0-dev:amd64 (1.13.1-2) ...
Setting up libltdl-dev:amd64 (2.4.6-9) ...
Setting up xfonts-base (1:1.0.5) ...
Setting up libglib2.0-dev:amd64 (2.58.3-2) ...
Setting up libnet-smtp-ssl-perl (1.04-1) ...
Setting up libmodule-runtime-perl (0.016-1) ...
Setting up libmailtools-perl (2.18-1) ...
Setting up libunicode-linebreak-perl (0.0.20190101-1) ...
Setting up libgdk-pixbuf2.0-0:amd64 (2.38.1+dfsg-1) ...
Setting up liblapack-dev:amd64 (3.8.0-2) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
Setting up libdist-checkconflicts-perl (0.11-1) ...
Setting up libxcb-render0-dev:amd64 (1.13.1-2) ...
Setting up libxt6:amd64 (1:1.1.5-1+b3) ...
Setting up texinfo (6.5.0.dfsg.1-4+b1) ...
Running mktexlsr. This may take some time. ... done.
Setting up texlive-fonts-extra-links (2018.20190227-2) ...
Setting up libxext-dev:amd64 (2:1.3.3-1+b2) ...
Setting up libcups2:amd64 (2.2.10-6) ...
Setting up libhttp-daemon-perl (6.01-3) ...
Setting up libgdk-pixbuf2.0-bin (2.38.1+dfsg-1) ...
Setting up lmodern (2.004.5-6) ...
Setting up libcairo-gobject2:amd64 (1.16.0-4) ...
Setting up libpangoft2-1.0-0:amd64 (1.42.4-6) ...
Setting up libxrender-dev:amd64 (1:0.9.10-1) ...
Setting up tex-gyre (20180621-3) ...
Setting up libgtk-3-common (3.24.5-1) ...
Setting up libpangocairo-1.0-0:amd64 (1.42.4-6) ...
Setting up libcairo-script-interpreter2:amd64 (1.16.0-4) ...
Setting up gsettings-desktop-schemas (3.28.1-1) ...
Setting up tk8.6 (8.6.9-2) ...
Setting up gtk-update-icon-cache (3.24.5-1) ...
Setting up libharfbuzz-dev:amd64 (2.3.1-1) ...
Setting up libxmu6:amd64 (2:1.1.2-2+b3) ...
Setting up gir1.2-freedesktop:amd64 (1.58.3-2) ...
Setting up libfontconfig1-dev:amd64 (2.13.1-2) ...
Setting up libglx-mesa0:amd64 (18.3.6-2) ...
Setting up libpangoxft-1.0-0:amd64 (1.42.4-6) ...
Setting up libglx0:amd64 (1.1.0-1) ...
Setting up libmime-lite-perl (3.030-2) ...
Setting up libmodule-implementation-perl (0.09-1) ...
Setting up libpackage-stash-perl (0.38-1) ...
Setting up po-debconf (1.0.21) ...
Setting up pango1.0-tools (1.42.4-6) ...
Setting up libxaw7:amd64 (2:1.0.13-1+b2) ...
Setting up libxss-dev:amd64 (1:1.2.3-1) ...
Setting up x11-xserver-utils (7.7+8) ...
Setting up libcupsimage2:amd64 (2.2.10-6) ...
Setting up librsvg2-2:amd64 (2.44.10-2.1) ...
Setting up libspecio-perl (0.43-1) ...
Setting up gir1.2-pango-1.0:amd64 (1.42.4-6) ...
Setting up libgl1:amd64 (1.1.0-1) ...
Setting up libxt-dev:amd64 (1:1.1.5-1+b3) ...
Setting up r-base-core (3.5.2-1) ...

Creating config file /etc/R/Renviron with new version
Setting up r-cran-crayon (1.3.4-4) ...
Setting up r-cran-multicore (0.2-1+b2) ...
Setting up r-cran-gtable (0.2.0-3) ...
Setting up r-cran-labeling (0.3-3) ...
Setting up r-cran-sourcetools (0.1.7-2) ...
Setting up librsvg2-common:amd64 (2.44.10-2.1) ...
Setting up r-cran-lattice (0.20-38-1) ...
Setting up r-cran-ps (1.3.0-1) ...
Setting up r-cran-nlme (3.1.137-1+b3) ...
Setting up r-cran-hexbin (1.27.2-2+b1) ...
Setting up r-cran-remotes (2.0.2-1) ...
Setting up r-cran-whisker (0.3-2-2) ...
Setting up r-cran-viridislite (0.3.0-3) ...
Setting up r-cran-cluster (2.0.7-1-1+b3) ...
Setting up r-cran-clisymbols (1.2.0-1) ...
Setting up x11-utils (7.7+4) ...
Setting up r-cran-nnet (7.3-12-2+b2) ...
Setting up libcairo2-dev:amd64 (1.16.0-4) ...
Setting up r-cran-lazyeval (0.2.1-3) ...
Setting up xterm (344-1) ...
update-alternatives: using /usr/bin/xterm to provide /usr/bin/x-terminal-emulator (x-terminal-emulator) in auto mode
update-alternatives: using /usr/bin/lxterm to provide /usr/bin/x-terminal-emulator (x-terminal-emulator) in auto mode
Setting up libatk-wrapper-java (0.33.3-22) ...
Setting up glib-networking:amd64 (2.58.0-2) ...
Setting up r-cran-clipr (0.5.0-1) ...
Setting up r-cran-commonmark (1.7-1) ...
Setting up r-cran-r6 (2.4.0-1) ...
Setting up r-cran-pkgkitten (0.1.4-2) ...
Setting up tk (8.6.9+1) ...
Setting up libb-hooks-endofscope-perl (0.24-1) ...
Setting up r-cran-git2r (0.24.0-1) ...
Setting up r-cran-magrittr (1.5-5) ...
Setting up r-cran-testit (0.9-1) ...
Setting up libcupsfilters1:amd64 (1.21.6-5) ...
Setting up libxft-dev:amd64 (2.3.2-2) ...
Setting up r-cran-littler (0.3.6-1) ...
Setting up r-cran-filehash (2.4-1-3) ...
Setting up r-cran-rcpp (1.0.0-1) ...
Setting up r-cran-curl (3.3+dfsg-1) ...
Setting up r-cran-codetools (0.2-16-1) ...
Setting up r-cran-bindr (0.1.1-2) ...
Setting up r-cran-boot (1.3-20-2) ...
Setting up r-cran-rematch (1.0.1-2) ...
Setting up r-cran-maps (3.3.0-2) ...
Setting up r-cran-rlang (0.3.1-2) ...
Setting up r-base-dev (3.5.2-1) ...
Setting up r-cran-assertthat (0.2.0-2) ...
Setting up libsoup2.4-1:amd64 (2.64.2-2) ...
Setting up littler (0.3.6-1) ...
Setting up libgs9:amd64 (9.27~dfsg-2) ...
Setting up r-cran-bindrcpp (0.2.2-2) ...
Setting up r-cran-xfun (0.4-1) ...
Setting up r-cran-sys (2.1-1) ...
Setting up r-cran-withr (2.1.2-3) ...
Setting up r-cran-backports (1.1.3-1) ...
Setting up r-cran-processx (3.2.1-1) ...
Setting up r-cran-mime (0.6-1) ...
Setting up r-cran-praise (1.0.0-3) ...
Setting up r-cran-generics (0.0.2-2) ...
Setting up x11-xkb-utils (7.7+4) ...
Setting up r-cran-base64enc (0.1-3-2) ...
Setting up r-cran-iterators (1.0.10-1) ...
Setting up r-cran-spatial (7.3-11-2+b2) ...
Setting up r-cran-abind (1.4-5-1.2) ...
Setting up r-cran-digest (0.6.18-1) ...
Setting up r-cran-yaml (2.2.0-1) ...
Setting up r-cran-xml2 (1.2.0-3) ...
Setting up r-cran-evaluate (0.13-1) ...
Setting up r-cran-dbi (1.0.0-2) ...
Setting up r-cran-highr (0.7+dfsg-1) ...
Setting up r-cran-foreach (1.4.4-2) ...
Setting up r-cran-prettyunits (1.0.2-3) ...
Setting up r-cran-fansi (0.4.0-1) ...
Setting up r-cran-mass (7.3-51.1-1) ...
Setting up r-cran-mockr (0.1-2) ...
Setting up ghostscript (9.27~dfsg-2) ...
Setting up r-cran-data.table (1.12.0+dfsg-1) ...
Setting up r-cran-xopen (1.0.0-1) ...
Setting up r-cran-glue (1.3.0-1) ...
Setting up r-cran-foreign (0.8.71-1) ...
Setting up r-cran-bit (1.1-14-1+b1) ...
Setting up r-cran-xtable (1:1.8-3-1) ...
Setting up r-cran-cli (1.0.1-1) ...
Setting up r-cran-bitops (1.0-6-4) ...
Setting up r-cran-rprojroot (1.3-2-2) ...
Setting up r-cran-bit64 (0.9-7-3) ...
Setting up r-cran-askpass (1.1-1) ...
Setting up r-cran-png (0.1-7-3) ...
Setting up r-cran-jsonlite (1.6+dfsg-1) ...
Setting up r-cran-rstudioapi (0.9.0-1) ...
Setting up r-cran-pkgconfig (2.0.2-1) ...
Setting up r-cran-testthat (2.0.1-1) ...
Setting up r-cran-mapproj (1.2.6-2) ...
Setting up r-cran-sp (1:1.3-1-1) ...
Setting up r-cran-utf8 (1.1.4-1+b1) ...
Setting up r-cran-brew (1.0-6-3) ...
Setting up r-cran-colorspace (1.4-0+dfsg-1) ...
Setting up r-cran-mockery (0.4.1.1+dfsg-1) ...
Setting up r-base-html (3.5.2-1) ...
Setting up r-cran-stringi (1.2.4-2) ...
Setting up adwaita-icon-theme (3.30.1-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up r-cran-markdown (0.9+dfsg-1) ...
Setting up r-cran-plyr (1.8.4-2) ...
Setting up r-cran-rcolorbrewer (1.1-2-2) ...
Setting up r-cran-ini (0.3.1-1) ...
Setting up libpango1.0-dev:amd64 (1.42.4-6) ...
Setting up r-cran-runit (0.4.32-2) ...
Setting up r-cran-hms (0.4.2-2) ...
Setting up libnamespace-clean-perl (0.27-1) ...
Setting up r-cran-memoise (1.1.0-2) ...
Setting up r-cran-purrr (0.3.0-1) ...
Setting up r-cran-rmysql (0.10.16-1) ...
Setting up r-cran-later (0.7.5+dfsg-2) ...
Setting up r-cran-blob (1.1.1-2) ...
Setting up r-cran-matrix (1.2-15-1) ...
Setting up r-cran-htmltools (0.3.6-2) ...
Setting up r-cran-tinytex (0.10-1) ...
Setting up tk8.6-dev:amd64 (8.6.9-2) ...
Setting up r-cran-kernsmooth (2.23-15-3+b4) ...
Setting up r-cran-mgcv (1.8-27-1) ...
Setting up r-cran-rpostgresql (0.6-2+dfsg-2) ...
Setting up texlive-binaries (2018.20181218.49446-1) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up r-cran-domc (1.3.5-2) ...
Setting up r-cran-tikzdevice (0.12-1) ...
Setting up xserver-common (2:1.20.4-1) ...
Setting up libsoup-gnome2.4-1:amd64 (2.64.2-2) ...
Setting up libnamespace-autoclean-perl (0.28-1) ...
Setting up r-cran-rsqlite (2.1.1-2+b1) ...
Setting up r-cran-sessioninfo (1.1.1-1) ...
Setting up texlive-base (2018.20190227-2) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
Setting up r-cran-progress (1.2.0-1) ...
Setting up r-cran-webutils (0.6-2) ...
Setting up r-cran-pillar (1.3.1-1) ...
Setting up r-cran-prettycode (1.0.2-1) ...
Setting up r-cran-fs (1.2.6+dfsg-1) ...
Setting up r-cran-openssl (1.2.2+dfsg-1) ...
Setting up librest-0.7-0:amd64 (0.8.1-1) ...
Setting up r-cran-stringr (1.4.0-1) ...
Setting up r-cran-class (7.3-15-1) ...
Setting up r-cran-callr (3.1.1-3) ...
Setting up r-cran-selectr (0.4-1-1) ...
Setting up libgtk-3-0:amd64 (3.24.5-1) ...
Setting up r-cran-desc (1.2.0-2) ...
Setting up libgtk2.0-0:amd64 (2.24.32-3) ...
Setting up xvfb (2:1.20.4-1) ...
Setting up texlive-plain-generic (2018.20190227-2) ...
Setting up r-cran-munsell (0.5.0-1) ...
Setting up r-cran-tibble (2.0.1-1) ...
Setting up r-cran-survival (2.43-3-1) ...
Setting up libgtk-3-bin (3.24.5-1) ...
Setting up r-cran-forcats (0.3.0-2) ...
Setting up libatk-wrapper-java-jni:amd64 (0.33.3-22) ...
Setting up r-cran-htmlwidgets (1.3+dfsg-1) ...
Setting up r-cran-tidyselect (0.2.5-1) ...
Setting up r-cran-reshape2 (1.4.3-2) ...
Setting up texlive-latex-base (2018.20190227-2) ...
Setting up r-cran-httr (1.4.0-3) ...
Setting up texlive-extra-utils (2018.20190227-2) ...
Setting up texlive-fonts-extra (2018.20190227-2) ...
Setting up r-cran-readr (1.3.1-1) ...
Setting up texlive-latex-recommended (2018.20190227-2) ...
Setting up r-cran-scales (1.0.0-2) ...
Setting up r-cran-promises (1.0.1-2) ...
Setting up texlive-generic-recommended (2018.20190227-2) ...
Setting up texlive-pictures (2018.20190227-2) ...
Setting up r-cran-dbitest (1.5-2-2) ...
Setting up r-cran-knitr (1.21+dfsg-2) ...
Setting up libgail18:amd64 (2.24.32-3) ...
Setting up r-cran-pkgbuild (1.0.2-1) ...
Setting up r-cran-cliapp (0.1.0-1) ...
Setting up libgtk2.0-bin (2.24.32-3) ...
Setting up texlive-fonts-recommended (2018.20190227-2) ...
Setting up liblog-dispatch-perl (2.68-1) ...
Setting up r-cran-dplyr (0.7.8-1) ...
Setting up tipa (2:1.3-20) ...
Regenerating '/var/lib/texmf/fmtutil.cnf-DEBIAN'... done.
Regenerating '/var/lib/texmf/fmtutil.cnf-TEXLIVEDIST'... done.
update-fmtutil has updated the following file(s):
	/var/lib/texmf/fmtutil.cnf-DEBIAN
	/var/lib/texmf/fmtutil.cnf-TEXLIVEDIST
If you want to activate the changes in the above file(s),
you should run fmtutil-sys or fmtutil.
Setting up r-cran-dbplyr (1.3.0-1) ...
Setting up r-cran-gh (1.0.1-1) ...
Setting up r-cran-lubridate (1.7.4-2) ...
Setting up r-cran-pkgload (1.0.2-1) ...
Setting up libgail-common:amd64 (2.24.32-3) ...
Setting up r-cran-haven (2.1.0-1) ...
Setting up r-cran-ggplot2 (3.1.0-1) ...
Setting up r-cran-usethis (1.4.0-1) ...
Setting up r-cran-cellranger (1.1.0-2) ...
Setting up r-cran-httpuv (1.4.5.1+dfsg-1) ...
Setting up r-cran-rpart (4.1-13-1+b1) ...
Setting up texlive-latex-extra (2018.20190227-2) ...
Setting up r-cran-shiny (1.2.0+dfsg-1) ...
Setting up r-cran-rvest (0.3.2-1) ...
Setting up r-cran-rmarkdown (1.11+dfsg-1) ...
Setting up r-cran-tidyr (0.8.2-1) ...
Setting up r-cran-rcmdcheck (1.3.2-2) ...
Setting up r-cran-roxygen2 (6.1.1-1) ...
Setting up r-cran-reprex (0.2.1-2) ...
Setting up r-recommended (3.5.2-1) ...
Setting up r-cran-readxl (1.3.0-1) ...
Setting up r-cran-devtools (2.0.1-1) ...
Setting up r-base (3.5.2-1) ...
Setting up r-cran-broom (0.5.1+dfsg-1) ...
Setting up r-cran-modelr (0.1.3-1) ...
Setting up r-cran-tidyverse (1.2.1-1) ...
Setting up dh-autoreconf (19) ...
Setting up rake (12.3.1-3) ...
Setting up liblwp-protocol-https-perl (6.07-2) ...
Setting up default-jre-headless (2:1.11-71) ...
Setting up libwww-perl (6.36-2) ...
Setting up libruby2.5:amd64 (2.5.5-3) ...
Setting up openjdk-11-jre-headless:amd64 (11.0.3+7-5) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
Setting up debhelper (12.1.1) ...
Setting up openjdk-11-jre:amd64 (11.0.3+7-5) ...
Setting up openjdk-11-jdk-headless:amd64 (11.0.3+7-5) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jaotc to provide /usr/bin/jaotc (jaotc) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up default-jre (2:1.11-71) ...
Setting up default-jdk-headless (2:1.11-71) ...
Setting up dh-strip-nondeterminism (1.1.2-1) ...
Setting up openjdk-11-jdk:amd64 (11.0.3+7-5) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode
Setting up ca-certificates-java (20190405) ...
head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Sonera_Class_2_Root_CA.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Certigna.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Izenpe.com.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Certinomis_-_Root_CA.pem
Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:ACCVRAIZ1.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:Global_Chambersign_Root_-_2008.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Deutsche_Telekom_Root_CA_2.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:GeoTrust_Primary_Certification_Authority.pem
Adding debian:TrustCor_ECA-1.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:Trustis_FPS_Root_CA.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:GeoTrust_Global_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem
Adding debian:DST_Root_CA_X3.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:TrustCor_RootCert_CA-1.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:AddTrust_External_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:Taiwan_GRCA.pem
Adding debian:GeoTrust_Universal_CA.pem
Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:Chambers_of_Commerce_Root_-_2008.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:EC-ACC.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:EE_Certification_Centre_Root_CA.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:thawte_Primary_Root_CA_-_G3.pem
Adding debian:Certplus_Class_2_Primary_CA.pem
Adding debian:LuxTrust_Global_Root_2.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:GeoTrust_Universal_CA_2.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:thawte_Primary_Root_CA_-_G2.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:TrustCor_RootCert_CA-2.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:thawte_Primary_Root_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:QuoVadis_Root_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
done.
Setting up libxml-parser-perl (2.44-4) ...
Setting up ruby2.5 (2.5.5-3) ...
Setting up libxml-twig-perl (1:3.50-1.1) ...
Setting up libnet-dbus-perl (1.1.0-5+b1) ...
Setting up default-jdk (2:1.11-71) ...
Setting up ruby (1:2.5.1) ...
Setting up libxml-sax-expat-perl (0.51-1) ...
update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::Expat with priority 50...
update-perl-sax-parsers: Updating overall Perl SAX parser modules info file...
Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version
Processing triggers for mime-support (3.62) ...
Processing triggers for libc-bin (2.28-10) ...
Processing triggers for systemd (241-5) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...

done.
done.
Processing triggers for tex-common (6.11) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Processing triggers for libgdk-pixbuf2.0-0:amd64 (2.38.1+dfsg-1) ...
[#86544] 2019/09/02 18:22:34 Cloning repositories
Cloning into 'wand'...
+ cd wand
+ git checkout -q 92e55c3d05f90605361797aea7d25d4adacff21e
+ cd wand
+ git submodule update --init
[#86544] 2019/09/02 18:22:35 Running task setup
[#86544] 2019/09/02 18:22:37 Running task build
setup 
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+ echo 'en_US.UTF-8 UTF-8'
+ sudo cp loc /etc/locale.gen
+ sudo locale-gen --purge en_US.UTF-8
Generating locales (this might take a while)...
  en_US.UTF-8... done
Generation complete.
+ sudo /usr/sbin/update-locale LANG=en_US.UTF-8
+ export LC_ALL=en_US.UTF-8
+ LC_ALL=en_US.UTF-8
+ export LANG=en_US.UTF-8
+ LANG=en_US.UTF-8
+ export LANGUAGE=en_US.UTF-8
+ LANGUAGE=en_US.UTF-8
+ echo 'options(repos = c(CRAN = "https://cloud.r-project.org"))'
+ echo R_LIBS_USER=/home/build/packages
+ mkdir /home/build/packages
+ export _R_CHECK_URLS_USE_CURL_=FALSE
+ _R_CHECK_URLS_USE_CURL_=FALSE
+ export _R_CHECK_LENGTH_1_CONDITION_=TRUE
+ _R_CHECK_LENGTH_1_CONDITION_=TRUE
+ export _R_CHECK_LENGTH_1_LOGIC2_=TRUE
+ _R_CHECK_LENGTH_1_LOGIC2_=TRUE
+ export _R_CHECK_TOPLEVEL_FILES_=TRUE
+ _R_CHECK_TOPLEVEL_FILES_=TRUE
+ export _R_CHECK_VC_DIRS_=TRUE
+ _R_CHECK_VC_DIRS_=TRUE
+ export _R_CHECK_TIMINGS_=10
+ _R_CHECK_TIMINGS_=10
+ export _R_CHECK_INSTALL_DEPENDS_=TRUE
+ _R_CHECK_INSTALL_DEPENDS_=TRUE
+ export _R_CHECK_SUGGESTS_ONLY_=TRUE
+ _R_CHECK_SUGGESTS_ONLY_=TRUE
+ export _R_CHECK_NO_RECOMMENDED_=TRUE
+ _R_CHECK_NO_RECOMMENDED_=TRUE
+ export _R_CHECK_EXECUTABLES_EXCLUSIONS_=FALSE
+ _R_CHECK_EXECUTABLES_EXCLUSIONS_=FALSE
+ export _R_CHECK_DOC_SIZES2_=TRUE
+ _R_CHECK_DOC_SIZES2_=TRUE
+ export _R_CHECK_CODE_ASSIGN_TO_GLOBALENV_=TRUE
+ _R_CHECK_CODE_ASSIGN_TO_GLOBALENV_=TRUE
+ export _R_CHECK_CODE_ATTACH_=TRUE
+ _R_CHECK_CODE_ATTACH_=TRUE
+ export _R_CHECK_CODE_DATA_INTO_GLOBALENV_=TRUE
+ _R_CHECK_CODE_DATA_INTO_GLOBALENV_=TRUE
+ export _R_CHECK_CODE_USAGE_VIA_NAMESPACES_=TRUE
+ _R_CHECK_CODE_USAGE_VIA_NAMESPACES_=TRUE
+ export _R_CHECK_DOT_FIRSTLIB_=TRUE
+ _R_CHECK_DOT_FIRSTLIB_=TRUE
+ export _R_CHECK_DEPRECATED_DEFUNCT_=TRUE
+ _R_CHECK_DEPRECATED_DEFUNCT_=TRUE
+ export _R_CHECK_REPLACING_IMPORTS_=TRUE
+ _R_CHECK_REPLACING_IMPORTS_=TRUE
+ export _R_CHECK_SCREEN_DEVICE_=stop
+ _R_CHECK_SCREEN_DEVICE_=stop
+ export _R_CHECK_TOPLEVEL_FILES_=TRUE
+ _R_CHECK_TOPLEVEL_FILES_=TRUE
+ export _R_CHECK_S3_METHODS_NOT_REGISTERED_=TRUE
+ _R_CHECK_S3_METHODS_NOT_REGISTERED_=TRUE
+ export _R_CHECK_OVERWRITE_REGISTERED_S3_METHODS_=TRUE
+ _R_CHECK_OVERWRITE_REGISTERED_S3_METHODS_=TRUE
+ export _R_CHECK_PRAGMAS_=TRUE
+ _R_CHECK_PRAGMAS_=TRUE
+ export _R_CHECK_CRAN_INCOMING_USE_ASPELL_=TRUE
+ _R_CHECK_CRAN_INCOMING_USE_ASPELL_=TRUE
+ export _R_CHECK_COMPILATION_FLAGS_=TRUE
+ _R_CHECK_COMPILATION_FLAGS_=TRUE
+ export _R_CHECK_R_DEPENDS_=warn
+ _R_CHECK_R_DEPENDS_=warn
+ export _R_CHECK_SERIALIZATION_=TRUE
+ _R_CHECK_SERIALIZATION_=TRUE
+ export _R_CHECK_R_ON_PATH_=TRUE
+ _R_CHECK_R_ON_PATH_=TRUE
+ export _R_CHECK_PACKAGES_USED_IN_TESTS_USE_SUBDIRS_=TRUE
+ _R_CHECK_PACKAGES_USED_IN_TESTS_USE_SUBDIRS_=TRUE
+ export _R_CHECK_SHLIB_OPENMP_FLAGS_=TRUE
+ _R_CHECK_SHLIB_OPENMP_FLAGS_=TRUE
+ export _R_CHECK_CONNECTIONS_LEFT_OPEN_=TRUE
+ _R_CHECK_CONNECTIONS_LEFT_OPEN_=TRUE
+ export _R_CHECK_FUTURE_FILE_TIMESTAMPS_=TRUE
+ _R_CHECK_FUTURE_FILE_TIMESTAMPS_=TRUE
+ export _R_CHECK_AUTOCONF_=TRUE
+ _R_CHECK_AUTOCONF_=TRUE
build 
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+ sudo R CMD javareconf
Java interpreter : /usr/lib/jvm/default-java/bin/java
Java version     : 11.0.3
Java home path   : /usr/lib/jvm/default-java
Java compiler    : /usr/lib/jvm/default-java/bin/javac
Java headers gen.: 
Java archive tool: /usr/lib/jvm/default-java/bin/jar

trying to compile and link a JNI program 
detected JNI cpp flags    : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux
detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux     -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-3.5.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c conftest.c -o conftest.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o conftest.so conftest.o -L/usr/lib/jvm/default-java/lib/server -ljvm -L/usr/lib/R/lib -lR


JAVA_HOME        : /usr/lib/jvm/default-java
Java library path: $(JAVA_HOME)/lib/server
JNI cpp flags    : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux
JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm
Updating Java configuration in /usr/lib/R
Done.

+ Rscript -e 'install.packages(c("covr", "tinytest"))'
Installing packages into ‘/home/build/packages’
(as ‘lib’ is unspecified)
also installing the dependency ‘rex’

trying URL 'https://cloud.r-project.org/src/contrib/rex_1.1.2.tar.gz'
Content type 'application/x-gzip' length 89430 bytes (87 KB)
==================================================
downloaded 87 KB

trying URL 'https://cloud.r-project.org/src/contrib/covr_3.3.1.tar.gz'
Content type 'application/x-gzip' length 143868 bytes (140 KB)
==================================================
downloaded 140 KB

trying URL 'https://cloud.r-project.org/src/contrib/tinytest_1.0.0.tar.gz'
Content type 'application/x-gzip' length 421120 bytes (411 KB)
==================================================
downloaded 411 KB

* installing *source* package ‘rex’ ...
** package ‘rex’ successfully unpacked and MD5 sums checked
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (rex)
* installing *source* package ‘tinytest’ ...
** package ‘tinytest’ successfully unpacked and MD5 sums checked
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (tinytest)
* installing *source* package ‘covr’ ...
** package ‘covr’ successfully unpacked and MD5 sums checked
** libs
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG      -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-3.5.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c reassign.c -o reassign.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o covr.so reassign.o -L/usr/lib/R/lib -lR
installing to /home/build/packages/covr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (covr)

The downloaded source packages are in
	‘/tmp/RtmpZqvppD/downloaded_packages’
+ R CMD build wand
* checking for file ‘wand/DESCRIPTION’ ... OK
* preparing ‘wand’:
* checking DESCRIPTION meta-information ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
* building ‘wand_0.6.0.tar.gz’

+ R CMD check wand_0.6.0.tar.gz
* using log directory ‘/home/build/wand.Rcheck’
* using R version 3.5.2 (2018-12-20)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* checking for file ‘wand/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘wand’ version ‘0.6.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘wand’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking R/sysdata.rda ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘tinytest.R’
 OK
* checking PDF version of manual ... OK
* DONE

Status: OK
Build complete: success 1 year, 6 months ago (took 8 minutes)